RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 VWA1Q6PCB0 445 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 EIF4E3Q8N5X7 224 aaKnown RBP11.73□□□□□ -0.53
GPC6-201ENST00000377047 PKIBQ9C010 78 aa11.73□□□□□ -0.53
GPC6-201ENST00000377047 C17orf51A8MQB3 221 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 RNF151Q2KHN1 245 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 RIPPLY2Q5TAB7 128 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 GBGT1Q8N5D6 347 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 OR10J6PQ8NGY7 276 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 FAM216AQ8WUB2 273 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 VAX2Q9UIW0 290 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 A0A1W2PS18 150 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 APOBEC3AP31941 199 aaPredicted RBP11.72□□□□□ -0.53
GPC6-201ENST00000377047 SUCLG1P53597 346 aaKnown RBP11.72□□□□□ -0.53
GPC6-201ENST00000377047 RPL8P62917 257 aaKnown RBP11.72□□□□□ -0.53
GPC6-201ENST00000377047 SPANXN1Q5VSR9 72 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 CENPVQ7Z7K6 275 aaPredicted RBP11.72□□□□□ -0.53
GPC6-201ENST00000377047 ZNF738Q8NE65 137 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 TMEM204Q9BSN7 226 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 ZNF703Q9H7S9 590 aaPredicted RBP11.72□□□□□ -0.53
GPC6-201ENST00000377047 KCNK7Q9Y2U2 307 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 CGB1A6NKQ9 187 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 PHOX2AO14813 284 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 CD1BP29016 333 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 HNRNPA3P51991 378 aaKnown RBP11.72□□□□□ -0.53
GPC6-201ENST00000377047 DLL3Q9NYJ7 618 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 DOCK3Q8IZD9 2030 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 SLC25A17O43808 307 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 LRRC75BQ2VPJ9 315 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 IL19Q9UHD0 177 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 CXCL3P19876 107 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 Q6ZT83 130 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 LDLRAD3Q86YD5 345 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 MMD2Q8IY49 270 aa11.72□□□□□ -0.53
GPC6-201ENST00000377047 hCG_38984A0A1B0GV85 526 aa11.71□□□□□ -0.53
GPC6-201ENST00000377047 PDE6DO43924 150 aa11.71□□□□□ -0.53
GPC6-201ENST00000377047 FOXH1O75593 365 aa11.71□□□□□ -0.53
GPC6-201ENST00000377047 LIPFP07098 398 aa11.71□□□□□ -0.53
GPC6-201ENST00000377047 PNKDQ8N490 385 aa11.71□□□□□ -0.53
GPC6-201ENST00000377047 CTHRC1Q96CG8 243 aa11.71□□□□□ -0.53
GPC6-201ENST00000377047 PF4P02776 101 aa11.71□□□□□ -0.53
GPC6-201ENST00000377047 IGLV3-21P80748 117 aaPredicted RBP11.71□□□□□ -0.53
GPC6-201ENST00000377047 MRPL54Q6P161 138 aaKnown RBP11.71□□□□□ -0.53
GPC6-201ENST00000377047 M0R2Z0 102 aa11.71□□□□□ -0.53
GPC6-201ENST00000377047 IFI6P09912 130 aa11.71□□□□□ -0.53
GPC6-201ENST00000377047 ZNF735P0CB33 412 aa11.71□□□□□ -0.53
GPC6-201ENST00000377047 RNF212Q495C1 297 aa11.71□□□□□ -0.53
GPC6-201ENST00000377047 TMEM54Q969K7 222 aa11.71□□□□□ -0.53
GPC6-201ENST00000377047 NINQ8N4C6 2090 aa11.71□□□□□ -0.54
GPC6-201ENST00000377047 SLC35E4Q6ICL7 350 aa11.71□□□□□ -0.54
GPC6-201ENST00000377047 CLRN3Q8NCR9 226 aa11.71□□□□□ -0.54
GPC6-201ENST00000377047 OR10J1P30954 320 aa11.71□□□□□ -0.54
GPC6-201ENST00000377047 ANAPC16Q96DE5 110 aa11.71□□□□□ -0.54
GPC6-201ENST00000377047 AKIRIN1Q9H9L7 192 aaPredicted RBP11.71□□□□□ -0.54
GPC6-201ENST00000377047 FAM206AQ9NX38 181 aa11.71□□□□□ -0.54
GPC6-201ENST00000377047 IGKV3-11P04433 115 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 COX5BP10606 129 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 NPVFQ9HCQ7 196 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 RALYQ9UKM9 306 aaKnown RBP11.7□□□□□ -0.54
GPC6-201ENST00000377047 H0Y980 276 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 CD1AP06126 327 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 TMEM78Q5T7P6 136 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 CLEC7AQ9BXN2 247 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 IGKV1D-42A0A075B6H8 117 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 ISG15P05161 165 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 ATP5G2Q06055 141 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 PMS2P11Q13670 270 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 AP5S1Q9NUS5 200 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 MELTFP08582 738 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 LAMTOR1Q6IAA8 161 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 CHCHD2Q9Y6H1 151 aaPredicted RBP11.7□□□□□ -0.54
GPC6-201ENST00000377047 OR2T10Q8NGZ9 312 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 VWCEQ96DN2 955 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 OR10C1Q96KK4 312 aa11.7□□□□□ -0.54
GPC6-201ENST00000377047 CORTO00230 105 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 WNT9BO14905 357 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 ADAM11O75078 769 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 PITX3O75364 302 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 AREGP15514 252 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 FAM106AQ4KMX7 169 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 PXMP4Q9Y6I8 212 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 IGKV3D-15A0A087WSY6 115 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 CTXND1A0A1B0GTU2 59 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 IGKV3-15P01624 115 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 TIMM23BQ5SRD1 257 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 LRRC75AQ8NAA5 344 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 OR11H7Q8NGC8 314 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 OR2D3Q8NGH3 330 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 FAM57AQ8TBR7 257 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 TOLLIPQ9H0E2 274 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 SCN10AQ9Y5Y9 1956 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 TRBV5-5A0A0J9YX44 114 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 PLAUP00749 431 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 LCN2P80188 198 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 IL22RA2Q969J5 263 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 NEURL2Q9BR09 285 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 RBM38Q9H0Z9 239 aaKnown RBP11.69□□□□□ -0.54
GPC6-201ENST00000377047 KCNAB3O43448 404 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 REG1AP05451 166 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 GLIPR1P48060 266 aa11.69□□□□□ -0.54
GPC6-201ENST00000377047 PNRC1Q12796 327 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms