RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 IGHV3-11P01762 117 aa10.6□□□□□ -0.71
CXCL12-202ENST00000374426 CT45A6P0DMU7 189 aa10.6□□□□□ -0.71
CXCL12-202ENST00000374426 CT45A5P0DMU8 189 aa10.6□□□□□ -0.71
CXCL12-202ENST00000374426 CT45A7P0DMV0 189 aa10.6□□□□□ -0.71
CXCL12-202ENST00000374426 IGHV4-30-4P0DP06 118 aa10.6□□□□□ -0.71
CXCL12-202ENST00000374426 CAPGP40121 348 aa10.6□□□□□ -0.71
CXCL12-202ENST00000374426 HMGN3Q15651 99 aa10.6□□□□□ -0.71
CXCL12-202ENST00000374426 FAM71F2Q6NXP2 309 aa10.6□□□□□ -0.71
CXCL12-202ENST00000374426 CD200R1LQ6Q8B3 271 aa10.6□□□□□ -0.71
CXCL12-202ENST00000374426 HAPLN4Q86UW8 402 aa10.6□□□□□ -0.71
CXCL12-202ENST00000374426 Q8N1Y9 231 aa10.6□□□□□ -0.71
CXCL12-202ENST00000374426 DERL3Q96Q80 235 aa10.6□□□□□ -0.71
CXCL12-202ENST00000374426 SULT4A1Q9BR01 284 aa10.6□□□□□ -0.71
CXCL12-202ENST00000374426 GAB2Q9UQC2 676 aa10.6□□□□□ -0.71
CXCL12-202ENST00000374426 PNMA8CA0A1B0GUJ8 204 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 IRGMA1A4Y4 181 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 DYNC1I1O14576 645 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 LDLRAD4O15165 306 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 HSPB1P04792 205 aaKnown RBP10.59□□□□□ -0.71
CXCL12-202ENST00000374426 SNRPBP14678 240 aaKnown RBP10.59□□□□□ -0.71
CXCL12-202ENST00000374426 PITPNAQ00169 270 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 DOC2BQ14184 412 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 ACTBL2Q562R1 376 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 RPL39P5Q59GN2 51 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 PYHIN1Q6K0P9 492 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 GLDNQ6ZMI3 551 aaPredicted RBP10.59□□□□□ -0.71
CXCL12-202ENST00000374426 PQLC1Q8N2U9 271 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 TMEM80Q96HE8 168 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 MS4A10Q96PG2 267 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 OR4C12Q96R67 309 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 UQCC2Q9BRT2 126 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 FAM103A1Q9BTL3 118 aaKnown RBP10.59□□□□□ -0.71
CXCL12-202ENST00000374426 PARP12Q9H0J9 701 aaKnown RBP10.59□□□□□ -0.71
CXCL12-202ENST00000374426 EDA2RQ9HAV5 297 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 LRRC42Q9Y546 428 aa10.59□□□□□ -0.71
CXCL12-202ENST00000374426 PLECQ15149 4684 aaKnown RBP10.58□□□□□ -0.72
CXCL12-202ENST00000374426 OR5H14A6NHG9 310 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 H0YJW9 148 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 RAB29O14966 203 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 IGLV1-51P01701 117 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 TPPP2P59282 170 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 TMEM267Q0VDI3 215 aaPredicted RBP10.58□□□□□ -0.72
CXCL12-202ENST00000374426 PLGLAQ15195 96 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 AKIRIN2Q53H80 203 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 UNQ5815/PRO19632Q6UWF5 114 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 PPP1R27Q86WC6 154 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 NKAIN3Q8N8D7 197 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 ZNF555Q8NEP9 628 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 ABHD5Q8WTS1 349 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 IL1F10Q8WWZ1 152 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 FLYWCH2Q96CP2 140 aaKnown RBP10.58□□□□□ -0.72
CXCL12-202ENST00000374426 RHOVQ96L33 236 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 FAAP24Q9BTP7 215 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 S100A14Q9HCY8 104 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 C19orf73Q9NVV2 129 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 SMPD3Q9NY59 655 aaPredicted RBP10.58□□□□□ -0.72
CXCL12-202ENST00000374426 CNOT2Q9NZN8 540 aaKnown RBP10.58□□□□□ -0.72
CXCL12-202ENST00000374426 PIPOXQ9P0Z9 390 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 STEAP1Q9UHE8 339 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 SLC23A1Q9UHI7 598 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 RNF150Q9ULK6 438 aa10.58□□□□□ -0.72
CXCL12-202ENST00000374426 A8MZ25 164 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 HSPA12AO43301 675 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 TAS2R43P59537 309 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 OR10K2Q6IF99 312 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 C6orf201Q7Z4U5 140 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 SVOPQ8N4V2 548 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 LFNGQ8NES3 379 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 OR5AN1Q8NGI8 311 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 ISOC1Q96CN7 298 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 ABHD14BQ96IU4 210 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 NEDD4LQ96PU5 975 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 CLCC1Q96S66 551 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 AGMATQ9BSE5 352 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 ABRACLQ9P1F3 81 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 GHRLQ9UBU3 117 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 STUB1Q9UNE7 303 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 WASHC3Q9Y3C0 194 aa10.57□□□□□ -0.72
CXCL12-202ENST00000374426 H7C2Y5 167 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 RBBP9O75884 186 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 NAPSAO96009 420 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 TFAP2AP05549 437 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 GSTP1P09211 210 aaKnown RBP10.56□□□□□ -0.72
CXCL12-202ENST00000374426 CELP19835 753 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 MC5RP33032 325 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 ST3GAL4Q11206 333 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 MED21Q13503 144 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 ZNF880Q6PDB4 577 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 ZNF562Q6V9R5 426 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 C10orf67Q8IYJ2 551 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 GGHQ92820 318 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 RNF5Q99942 180 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 RSRP1Q9BUV0 290 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 ELOVL1Q9BW60 279 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 SLA2Q9H6Q3 261 aa10.56□□□□□ -0.72
CXCL12-202ENST00000374426 METTL1Q9UBP6 276 aaKnown RBP10.56□□□□□ -0.72
CXCL12-202ENST00000374426 ARPC1BO15143 372 aaKnown RBP10.55□□□□□ -0.72
CXCL12-202ENST00000374426 PROP1O75360 226 aa10.55□□□□□ -0.72
CXCL12-202ENST00000374426 CA2P00918 260 aa10.55□□□□□ -0.72
CXCL12-202ENST00000374426 TRGV3P03979 118 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms