RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 MMDQ15546 238 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 TBCEQ15813 527 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 CXorf66Q5JRM2 361 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 IL1F10Q8WWZ1 152 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 KCTD7Q96MP8 289 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 DUX3Q96PT4 197 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 HDHD3Q9BSH5 251 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 URM1Q9BTM9 101 aaKnown RBP10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 MCRIP2Q9BUT9 160 aaKnown RBP10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 GPR61Q9BZJ8 451 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 GHITMQ9H3K2 345 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 ACOT13Q9NPJ3 140 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 PIPOXQ9P0Z9 390 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 ABRACLQ9P1F3 81 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 STEAP1Q9UHE8 339 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 SLC23A1Q9UHI7 598 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 SHISA3A0PJX4 238 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 NUDT19A8MXV4 375 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 RAB29O14966 203 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 NBR2O15453 112 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 ST8SIA5O15466 376 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 SLC2A2P11168 524 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 CALRP27797 417 aaKnown RBP10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 CLDN12P56749 244 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 PLA2G7Q13093 441 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 FHL3Q13643 280 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 RAB11BQ15907 218 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 SSX1Q16384 188 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 C5orf64Q2M2E5 130 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 C2orf76Q3KRA6 126 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 C19orf54Q5BKX5 351 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 PLAC9Q5JTB6 97 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 CD200R1LQ6Q8B3 271 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 PTX4Q96A99 478 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 FAM3DQ96BQ1 224 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 ARHGAP5-AS1Q96IT6 56 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 PECRQ9BY49 303 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 OR51J1Q9H342 316 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 PLGRKTQ9HBL7 147 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 Q9N2K0 584 aa10.67□□□□□ -0.7
TNFRSF1A-202ENST00000366159 IGKV1-6A0A0C4DH72 117 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 G3V318 75 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 SCTP09683 121 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 VDAC1P21796 283 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 HSPA13P48723 471 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 VEGFCP49767 419 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 CRIP2P52943 208 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 HLA-DRB3P79483 266 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 DEFB136Q30KP8 78 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 RPL39P5Q59GN2 51 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 IZUMO2Q6UXV1 221 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 MINDY2Q8NBR6 621 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 OR5AN1Q8NGI8 311 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 OR8U1Q8NH10 309 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 CCDC90BQ9GZT6 254 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 TOLLIPQ9H0E2 274 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 C11orf54Q9H0W9 315 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 KLK15Q9H2R5 256 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 VCX3BQ9H321 246 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 CHMP1AQ9HD42 196 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 OR1A1Q9P1Q5 309 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 MGAT4AQ9UM21 535 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 KCNK7Q9Y2U2 307 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 V9GY05 133 aa10.66□□□□□ -0.7
TNFRSF1A-202ENST00000366159 TMEM272A0A1B0GTI8 110 aa10.65□□□□□ -0.7
TNFRSF1A-202ENST00000366159 H0YJW9 148 aa10.65□□□□□ -0.7
TNFRSF1A-202ENST00000366159 I3L521 148 aa10.65□□□□□ -0.7
TNFRSF1A-202ENST00000366159 ATP6V0E1O15342 81 aa10.65□□□□□ -0.7
TNFRSF1A-202ENST00000366159 OR5H8P0DN80 308 aa10.65□□□□□ -0.7
TNFRSF1A-202ENST00000366159 ZBTB25P24278 435 aa10.65□□□□□ -0.7
TNFRSF1A-202ENST00000366159 PSMD7P51665 324 aa10.65□□□□□ -0.7
TNFRSF1A-202ENST00000366159 LIN54Q6MZP7 749 aa10.65□□□□□ -0.7
TNFRSF1A-202ENST00000366159 FAM131AQ6UXB0 335 aa10.65□□□□□ -0.7
TNFRSF1A-202ENST00000366159 ZNF491Q8N8L2 437 aa10.65□□□□□ -0.7
TNFRSF1A-202ENST00000366159 C4orf3Q8WVX3 66 aa10.65□□□□□ -0.7
TNFRSF1A-202ENST00000366159 ABHD14BQ96IU4 210 aa10.65□□□□□ -0.7
TNFRSF1A-202ENST00000366159 UBE2E2Q96LR5 201 aa10.65□□□□□ -0.7
TNFRSF1A-202ENST00000366159 C12orf4Q9NQ89 552 aa10.65□□□□□ -0.7
TNFRSF1A-202ENST00000366159 TRAV1-2A0A0B4J238 106 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 OR5H14A6NHG9 310 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 DENRO43583 198 aaKnown RBP10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 EGR2P11161 476 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 MC5RP33032 325 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 CEACAM6P40199 344 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 NDPQ00604 133 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RUNX1Q01196 453 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 ZNF367Q7RTV3 350 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 OR56B1Q8NGI3 324 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 SETD6Q8TBK2 473 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 EDARADDQ8WWZ3 215 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 CNBD2Q96M20 576 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RNF5Q99942 180 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 NDUFB11Q9NX14 153 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RAB22AQ9UL26 194 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 RAB26Q9ULW5 256 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 FBXO7Q9Y3I1 522 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 WSB1Q9Y6I7 421 aa10.64□□□□□ -0.71
TNFRSF1A-202ENST00000366159 KMT2CQ8NEZ4 4911 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-202ENST00000366159 TRAV41A0A0B4J266 112 aa10.63□□□□□ -0.71
TNFRSF1A-202ENST00000366159 TRDCB7Z8K6 153 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms