RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 ZCCHC14Q8WYQ9 949 aaKnown RBP13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 SEBOXQ9HB31 216 aaPredicted RBP13.78□□□□□ -0.2
CLSTN1-201ENST00000361311 ZSWIM8A7E2V4 1837 aa13.77□□□□□ -0.2
CLSTN1-201ENST00000361311 APCSP02743 223 aa13.77□□□□□ -0.2
CLSTN1-201ENST00000361311 CYC1P08574 325 aa13.77□□□□□ -0.2
CLSTN1-201ENST00000361311 ARSJQ5FYB0 599 aaPredicted RBP13.77□□□□□ -0.2
CLSTN1-201ENST00000361311 WDFY1Q8IWB7 410 aa13.77□□□□□ -0.2
CLSTN1-201ENST00000361311 OR8I2Q8N0Y5 310 aa13.77□□□□□ -0.2
CLSTN1-201ENST00000361311 ZNF488Q96MN9 340 aa13.77□□□□□ -0.2
CLSTN1-201ENST00000361311 SCN8AQ9UQD0 1980 aa13.77□□□□□ -0.2
CLSTN1-201ENST00000361311 CD1BP29016 333 aa13.77□□□□□ -0.21
CLSTN1-201ENST00000361311 FGF12P61328 243 aa13.77□□□□□ -0.21
CLSTN1-201ENST00000361311 P2RY6Q15077 328 aa13.77□□□□□ -0.21
CLSTN1-201ENST00000361311 C10orf91Q5T1B1 145 aa13.77□□□□□ -0.21
CLSTN1-201ENST00000361311 SLC22A20A6NK97 555 aa13.77□□□□□ -0.21
CLSTN1-201ENST00000361311 SHISA7A6NL88 538 aa13.77□□□□□ -0.21
CLSTN1-201ENST00000361311 IGKV3-11P04433 115 aa13.77□□□□□ -0.21
CLSTN1-201ENST00000361311 TNFSF10P50591 281 aa13.77□□□□□ -0.21
CLSTN1-201ENST00000361311 RTL8BQ17RB0 113 aa13.77□□□□□ -0.21
CLSTN1-201ENST00000361311 TRAT1Q6PIZ9 186 aa13.77□□□□□ -0.21
CLSTN1-201ENST00000361311 YTHDF2Q9Y5A9 579 aaKnown RBP13.77□□□□□ -0.21
CLSTN1-201ENST00000361311 CT45A10P0DMU9 189 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 OR5A2Q8NGI9 324 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 TXNDC17Q9BRA2 123 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 TRBV24-1A0A075B6N3 115 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 SERTM2A0A1B0GWG4 89 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 CBLN1P23435 193 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 RSPO4Q2I0M5 234 aaPredicted RBP13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 D2HGDHQ8N465 521 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 IGKV1D-8A0A087WSZ0 117 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 BMPR1BO00238 502 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 VENTXO95231 258 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 TMEM170AQ8WVE7 144 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 VOPP1Q96AW1 172 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 TECRQ9NZ01 308 aaKnown RBP13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 SRCAPQ6ZRS2 3230 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 ESPL1Q14674 2120 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 CSRP2Q16527 193 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 KIAA1644Q3SXP7 199 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 OR4A47Q6IF82 309 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 FGFRL1Q8N441 504 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 OR6C3Q9NZP0 311 aa13.76□□□□□ -0.21
CLSTN1-201ENST00000361311 TRAV38-1A0A0B4J264 116 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 SRD5A2P31213 254 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 GNG10P50151 68 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 PSG4Q00888 419 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 NHLH1Q02575 133 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 ATXN7O15265 892 aaPredicted RBP13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 SRFP11831 508 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 S100A7AQ86SG5 101 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 RPL23P62829 140 aaKnown RBP13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 UBE2L3P68036 154 aaKnown RBP13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 RPL24P83731 157 aaKnown RBP13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM89BQ8N5H3 189 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 IGKV1-9A0A0C4DH69 117 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 KLRC4-KLRK1H3BQV0 150 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 UCP1P25874 307 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 HYAL1Q12794 435 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 PMCHL1Q16048 86 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 TMEM251Q8N6I4 163 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 ZBTB34Q8NCN2 500 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 DEFB108BQ8NET1 73 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 QTRT1Q9BXR0 403 aaKnown RBP13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 OR2J1Q9GZK6 312 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 HS3ST3B1Q9Y662 390 aa13.75□□□□□ -0.21
CLSTN1-201ENST00000361311 IGHV2-5P01817 119 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 NPBWR2P48146 333 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 MFAP2P55001 183 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 SLC22A18ASQ8N1D0 253 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 C18orf12Q96KH6 178 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 GPR35Q9HC97 309 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 J3QT63 122 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 IGHV3-13P01766 116 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 IGHV3-7P01780 117 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 NUBP1P53384 320 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 BEND2Q8NDZ0 799 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 WDYHV1Q96HA8 205 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 MIEN1Q9BRT3 115 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 TEX50A0A1B0GTY4 177 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM90A10PA6NDY2 464 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM90A18PA6NE21 464 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM90A16PA6NEW6 464 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM90A20PA6NIJ5 464 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM90A8PA6NJQ4 464 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM90A7PA6NKC0 464 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM90A22PA8MWA6 464 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM90A12PA8MX19 464 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM90A5PA8MXJ8 464 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM90A23PA8MXZ1 464 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 CSN3P07498 182 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM90A15PP0C7V4 464 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM90A13PP0C7W8 464 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM90A14PP0C7W9 464 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM90A24PP0C7X0 464 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 SFRP2Q96HF1 295 aa13.74□□□□□ -0.21
CLSTN1-201ENST00000361311 CCL3P10147 92 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 LYL1P12980 280 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 FHL1Q13642 323 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 A0A0J9YW62 118 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 A6NCN8 305 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms