RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 Q96M66 194 aa12.17□□□□□ -0.46
DDX55-202ENST00000354291 CHCHD6Q9BRQ6 235 aa12.17□□□□□ -0.46
DDX55-202ENST00000354291 MND1Q9BWT6 205 aa12.17□□□□□ -0.46
DDX55-202ENST00000354291 CST11Q9H112 138 aa12.17□□□□□ -0.46
DDX55-202ENST00000354291 FKBP14Q9NWM8 211 aa12.17□□□□□ -0.46
DDX55-202ENST00000354291 ZNF107Q9UII5 783 aaPredicted RBP12.17□□□□□ -0.46
DDX55-202ENST00000354291 IGLV1-40P01703 118 aa12.16□□□□□ -0.46
DDX55-202ENST00000354291 UBBP0CG47 229 aa12.16□□□□□ -0.46
DDX55-202ENST00000354291 ZNF137PP52743 207 aa12.16□□□□□ -0.46
DDX55-202ENST00000354291 ACSM3Q53FZ2 586 aa12.16□□□□□ -0.46
DDX55-202ENST00000354291 ZNF554Q86TJ5 538 aa12.16□□□□□ -0.46
DDX55-202ENST00000354291 PRR18Q8N4B5 295 aa12.16□□□□□ -0.46
DDX55-202ENST00000354291 OR8H1Q8NGG4 311 aa12.16□□□□□ -0.46
DDX55-202ENST00000354291 ELOVL1Q9BW60 279 aa12.16□□□□□ -0.46
DDX55-202ENST00000354291 TOLLIPQ9H0E2 274 aa12.16□□□□□ -0.46
DDX55-202ENST00000354291 KCNIP1Q9NZI2 227 aa12.16□□□□□ -0.46
DDX55-202ENST00000354291 UBE2QL1A1L167 161 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 PTGES3LE9PB15 166 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 PDCD6O75340 191 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 CDK1P06493 297 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 RCC1P18754 421 aaPredicted RBP12.15□□□□□ -0.46
DDX55-202ENST00000354291 ZNF134P52741 427 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 CT45A1Q5HYN5 189 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 GLT8D1Q68CQ7 371 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 SIGIRRQ6IA17 410 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 RPP25LQ8N5L8 163 aaKnown RBP12.15□□□□□ -0.46
DDX55-202ENST00000354291 ZNF439Q8NDP4 499 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 OR1L1Q8NH94 360 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 CT45A3Q8NHU0 189 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 GATAD1Q8WUU5 269 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 HIPK2Q9H2X6 1198 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 TAF9BQ9HBM6 251 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 OR2S2Q9NQN1 319 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 MBNL3Q9NUK0 354 aaKnown RBP12.15□□□□□ -0.46
DDX55-202ENST00000354291 SCN3BQ9NY72 215 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 STUB1Q9UNE7 303 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 LRRC42Q9Y546 428 aa12.15□□□□□ -0.46
DDX55-202ENST00000354291 SLC31A2O15432 143 aa12.14□□□□□ -0.47
DDX55-202ENST00000354291 IGLV1-51P01701 117 aa12.14□□□□□ -0.47
DDX55-202ENST00000354291 VHLP40337 213 aa12.14□□□□□ -0.47
DDX55-202ENST00000354291 SPHARQ15513 63 aa12.14□□□□□ -0.47
DDX55-202ENST00000354291 MORN2Q502X0 79 aa12.14□□□□□ -0.47
DDX55-202ENST00000354291 C6orf141Q5SZD1 244 aa12.14□□□□□ -0.47
DDX55-202ENST00000354291 OR10V1Q8NGI7 309 aa12.14□□□□□ -0.47
DDX55-202ENST00000354291 CASTOR1Q8WTX7 329 aa12.14□□□□□ -0.47
DDX55-202ENST00000354291 PHYHIPQ92561 330 aa12.14□□□□□ -0.47
DDX55-202ENST00000354291 FAM46BQ96A09 425 aa12.14□□□□□ -0.47
DDX55-202ENST00000354291 NEDD4LQ96PU5 975 aa12.14□□□□□ -0.47
DDX55-202ENST00000354291 ST6GALNAC5Q9BVH7 336 aa12.14□□□□□ -0.47
DDX55-202ENST00000354291 PARP11Q9NR21 331 aa12.14□□□□□ -0.47
DDX55-202ENST00000354291 ZNF580Q9UK33 172 aa12.14□□□□□ -0.47
DDX55-202ENST00000354291 TRAV41A0A0B4J266 112 aa12.13□□□□□ -0.47
DDX55-202ENST00000354291 ATP6V0E1O15342 81 aa12.13□□□□□ -0.47
DDX55-202ENST00000354291 LANCL1O43813 399 aa12.13□□□□□ -0.47
DDX55-202ENST00000354291 BRI3O95415 125 aa12.13□□□□□ -0.47
DDX55-202ENST00000354291 SRMP19623 302 aa12.13□□□□□ -0.47
DDX55-202ENST00000354291 INSL4Q14641 139 aa12.13□□□□□ -0.47
DDX55-202ENST00000354291 C1orf100Q5SVJ3 147 aa12.13□□□□□ -0.47
DDX55-202ENST00000354291 GALMQ96C23 342 aa12.13□□□□□ -0.47
DDX55-202ENST00000354291 TPSG1Q9NRR2 321 aa12.13□□□□□ -0.47
DDX55-202ENST00000354291 RGS11O94810 467 aa12.12□□□□□ -0.47
DDX55-202ENST00000354291 IGHV3-11P01762 117 aa12.12□□□□□ -0.47
DDX55-202ENST00000354291 LGALS1P09382 135 aaKnown RBP12.12□□□□□ -0.47
DDX55-202ENST00000354291 RPS27AP62979 156 aaKnown RBP12.12□□□□□ -0.47
DDX55-202ENST00000354291 HTD2P86397 168 aa12.12□□□□□ -0.47
DDX55-202ENST00000354291 MED22Q15528 200 aa12.12□□□□□ -0.47
DDX55-202ENST00000354291 RBM48Q5RL73 367 aaKnown RBP12.12□□□□□ -0.47
DDX55-202ENST00000354291 LRRTM1Q86UE6 522 aa12.12□□□□□ -0.47
DDX55-202ENST00000354291 KCNG3Q8TAE7 436 aa12.12□□□□□ -0.47
DDX55-202ENST00000354291 MRPL30Q8TCC3 161 aaKnown RBP12.12□□□□□ -0.47
DDX55-202ENST00000354291 FLYWCH2Q96CP2 140 aaKnown RBP12.12□□□□□ -0.47
DDX55-202ENST00000354291 NABP2Q9BQ15 211 aa12.12□□□□□ -0.47
DDX55-202ENST00000354291 JPT1Q9UK76 154 aa12.12□□□□□ -0.47
DDX55-202ENST00000354291 CEPT1Q9Y6K0 416 aa12.12□□□□□ -0.47
DDX55-202ENST00000354291 YPEL1O60688 119 aa12.11□□□□□ -0.47
DDX55-202ENST00000354291 HSPB1P04792 205 aaKnown RBP12.11□□□□□ -0.47
DDX55-202ENST00000354291 HTR2CP28335 458 aa12.11□□□□□ -0.47
DDX55-202ENST00000354291 HSD17B12Q53GQ0 312 aa12.11□□□□□ -0.47
DDX55-202ENST00000354291 LY6G6FQ5SQ64 297 aa12.11□□□□□ -0.47
DDX55-202ENST00000354291 CEACAM19Q7Z692 300 aa12.11□□□□□ -0.47
DDX55-202ENST00000354291 GTSCR1Q86UQ5 136 aa12.11□□□□□ -0.47
DDX55-202ENST00000354291 OR52L2PQ8NGH6 319 aa12.11□□□□□ -0.47
DDX55-202ENST00000354291 YPEL2Q96QA6 119 aa12.11□□□□□ -0.47
DDX55-202ENST00000354291 ABHD14AQ9BUJ0 271 aa12.11□□□□□ -0.47
DDX55-202ENST00000354291 TMEM59Q9BXS4 323 aa12.11□□□□□ -0.47
DDX55-202ENST00000354291 ABRACLQ9P1F3 81 aa12.11□□□□□ -0.47
DDX55-202ENST00000354291 LSM2Q9Y333 95 aaKnown RBP12.11□□□□□ -0.47
DDX55-202ENST00000354291 TPRKBQ9Y3C4 175 aa12.11□□□□□ -0.47
DDX55-202ENST00000354291 ANKRD65E5RJM6 399 aa12.1□□□□□ -0.47
DDX55-202ENST00000354291 UCHL1P09936 223 aa12.1□□□□□ -0.47
DDX55-202ENST00000354291 CD37P11049 281 aa12.1□□□□□ -0.47
DDX55-202ENST00000354291 LSAMPQ13449 338 aa12.1□□□□□ -0.47
DDX55-202ENST00000354291 MMDQ15546 238 aa12.1□□□□□ -0.47
DDX55-202ENST00000354291 OR10K2Q6IF99 312 aa12.1□□□□□ -0.47
DDX55-202ENST00000354291 MINDY2Q8NBR6 621 aa12.1□□□□□ -0.47
DDX55-202ENST00000354291 SULT4A1Q9BR01 284 aa12.1□□□□□ -0.47
DDX55-202ENST00000354291 FAAP24Q9BTP7 215 aa12.1□□□□□ -0.47
DDX55-202ENST00000354291 A0A1W2PN81 502 aa12.09□□□□□ -0.47
DDX55-202ENST00000354291 CXorf65A6NEN9 183 aa12.09□□□□□ -0.47
DDX55-202ENST00000354291 H0Y980 276 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms