RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 MS4A4AQ96JQ5 239 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 RSPO3Q9BXY4 272 aaPredicted RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 H3BNC9 293 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 HERVK_113P61574 105 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 RUNX1Q01196 453 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 MMD2Q8IY49 270 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 POLR3KQ9Y2Y1 108 aaPredicted RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 ZNF217O75362 1048 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 DHRS3O75911 302 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 CA3P07451 260 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 CEACAM6P40199 344 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 OR3A4PP47883 348 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 NANOS3P60323 173 aaKnown RBP4.4□□□□□ -1.7
SKP1-202ENST00000353411 KIRREL2Q6UWL6 708 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 BHLHE23Q8NDY6 225 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 SPANXDQ9BXN6 97 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 GNB1LQ9BYB4 327 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 MGAMO43451 1857 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 LOC107984156A0A0G2JMH3 177 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 A0A1W2PRU2 124 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 M0QZ24 198 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 PPYP01298 95 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 P01737 135 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 VSIG8P0DPA2 414 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 TIMP2P16035 220 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 ARL17AQ8IVW1 177 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 VSTM2AQ8TAG5 236 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 TMEM222Q9H0R3 208 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.4□□□□□ -1.7
SKP1-202ENST00000353411 PPIAL4DF5H284 164 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 COX7A2P2O60397 106 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 KLF7O75840 302 aaPredicted RBP4.4□□□□□ -1.7
SKP1-202ENST00000353411 MPZL1O95297 269 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 SMIM17P0DL12 118 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 GAGE2BQ13066 116 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 GAGE2EQ4V326 116 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 C1orf100Q5SVJ3 147 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 TRAT1Q6PIZ9 186 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 OR1N2Q8NGR9 330 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 CNRIP1Q96F85 164 aaPredicted RBP4.4□□□□□ -1.7
SKP1-202ENST00000353411 HIST1H4GQ99525 98 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 PLSCR4Q9NRQ2 329 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 SLC7A10Q9NS82 523 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 GAGE2DQ9UEU5 116 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 PATJQ8NI35 1801 aa4.4□□□□□ -1.7
SKP1-202ENST00000353411 KLK10O43240 276 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 PPIHO43447 177 aaKnown RBP4.4□□□□□ -1.71
SKP1-202ENST00000353411 CER1O95813 267 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 EPPINO95925 133 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 RPS27P42677 84 aaKnown RBP4.4□□□□□ -1.71
SKP1-202ENST00000353411 RND2P52198 227 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 INSM1Q01101 510 aaPredicted RBP4.4□□□□□ -1.71
SKP1-202ENST00000353411 TMEM211Q6ICI0 200 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 TMEM144Q7Z5S9 345 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 SCCPDHQ8NBX0 429 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 TMEM40Q8WWA1 233 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 FAM131CQ96AQ9 280 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 OR8B2Q96RD0 313 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 KLF16Q9BXK1 252 aaPredicted RBP4.4□□□□□ -1.71
SKP1-202ENST00000353411 HIF1ANQ9NWT6 349 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 DAPP1Q9UN19 280 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 EML6Q6ZMW3 1958 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 M0R135 149 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 CCL16O15467 120 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 PDCD6O75340 191 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 MFAP4P55083 255 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 FOXL1Q12952 345 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 NR0B2Q15466 257 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 IGFBP7Q16270 282 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 FER1L6-AS1Q8NA97 138 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 C1orf162Q8NEQ5 155 aaPredicted RBP4.4□□□□□ -1.71
SKP1-202ENST00000353411 ZNF799Q96GE5 643 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 NDFIP1Q9BT67 221 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 PHIPQ8WWQ0 1821 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 IGLV3-16A0A075B6K0 115 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 TRAV1-1A0A0B4J248 108 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 A8MWL6 223 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 ZNF205O95201 554 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 CRYAAP02489 173 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 TSPO2Q5TGU0 170 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 GNG12Q9UBI6 72 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 CD207Q9UJ71 328 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 MRPS18BQ9Y676 258 aaKnown RBP4.4□□□□□ -1.71
SKP1-202ENST00000353411 TNFSF11O14788 317 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 SOCS1O15524 211 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 ACRP10323 421 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 HSD52Q0P140 79 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 OTPQ5XKR4 325 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 LINC01551Q86U37 167 aa4.4□□□□□ -1.71
SKP1-202ENST00000353411 MAFAQ8NHW3 353 aaPredicted RBP4.4□□□□□ -1.71
SKP1-202ENST00000353411 A0A0G2JLM5 398 aa4.39□□□□□ -1.71
SKP1-202ENST00000353411 IL6RP08887 468 aaPredicted RBP4.39□□□□□ -1.71
SKP1-202ENST00000353411 RBPJQ06330 500 aa4.39□□□□□ -1.71
SKP1-202ENST00000353411 LILRA6Q6PI73 481 aa4.39□□□□□ -1.71
SKP1-202ENST00000353411 TAF15Q92804 592 aaKnown RBP eCLIP4.39□□□□□ -1.71
SKP1-202ENST00000353411 GRAMD2BQ96HH9 432 aa4.39□□□□□ -1.71
SKP1-202ENST00000353411 C1QTNF9BB2RNN3 333 aa4.39□□□□□ -1.71
SKP1-202ENST00000353411 RAMP3O60896 148 aa4.39□□□□□ -1.71
SKP1-202ENST00000353411 TGFAP01135 160 aa4.39□□□□□ -1.71
SKP1-202ENST00000353411 RPL23P62829 140 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms