RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 OR5H2Q8NGV7 314 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 OR8U1Q8NH10 309 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 FAM216AQ8WUB2 273 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 ST6GALNAC6Q969X2 333 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 TNFRSF19Q9NS68 423 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 MTFP1Q9UDX5 166 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 RNF150Q9ULK6 438 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 ANAPC10Q9UM13 185 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 OR2W1Q9Y3N9 320 aa9.62□□□□□ -0.87
SPTLC1-202ENST00000337841 NSD1Q96L73 2696 aaPredicted RBP9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 DNAJC9-AS1A6NH13 148 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 ZNF736B4DX44 427 aaPredicted RBP9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 H3BUX3 64 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 HSD17B6O14756 317 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 SLC22A5O76082 557 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 VENTXO95231 258 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 IGHV4-59P01825 116 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 PMP2P02689 132 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 FAM106CPP0CH98 169 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 NFYAP23511 347 aaPredicted RBP9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 PAX6P26367 422 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 HLA-DMAP28067 261 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 FCGR2CP31995 323 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 GPR12P47775 334 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 LUMP51884 338 aaPredicted RBP9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 ZNF137PP52743 207 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 ACTBL2Q562R1 376 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 PYDC2Q56P42 97 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 RNASE12Q5GAN4 147 aaKnown RBP9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 C16orf87Q6PH81 154 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 CCDC190Q86UF4 302 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 THNSL2Q86YJ6 484 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 CAPSLQ8WWF8 208 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 GIMAP1Q8WWP7 306 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 SNAPC3Q92966 411 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 AGMATQ9BSE5 352 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 PARP12Q9H0J9 701 aaKnown RBP9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 TAS2R8Q9NYW2 309 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 KLK11Q9UBX7 282 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 PITPNC1Q9UKF7 332 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 GAB2Q9UQC2 676 aa9.61□□□□□ -0.87
SPTLC1-202ENST00000337841 DSCAML1Q8TD84 2053 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 IGHV1-3A0A0C4DH29 117 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 GSTZ1O43708 216 aaPredicted RBP9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 IFNA6P05013 189 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 CRYBA1P05813 215 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 ETV6P41212 452 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 REG1BP48304 166 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 RFX2P48378 723 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 RAB13P51153 203 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 TSPAN5P62079 268 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 UBA52P62987 128 aaKnown RBP9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 DGCR2P98153 550 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 DYRK1AQ13627 763 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 FAM71F2Q6NXP2 309 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 DHRS11Q6UWP2 260 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 LINC00299Q6ZSB3 139 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 OVCH2Q7RTZ1 564 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 PRIMA1Q86XR5 153 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 TMEM229BQ8NBD8 167 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 OR6F1Q8NGZ6 308 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 ZFAND2BQ8WV99 257 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 SMIM4Q8WVI0 70 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 RTN4IP1Q8WWV3 396 aaPredicted RBP9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 ABHD14BQ96IU4 210 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 DUX5Q96PT3 197 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 IFI27L2Q9H2X8 130 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 ESM1Q9NQ30 184 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 EHFQ9NZC4 300 aa9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 ZNF107Q9UII5 783 aaPredicted RBP9.6□□□□□ -0.87
SPTLC1-202ENST00000337841 J3QRK9 145 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 TIMM23O14925 209 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 TUSC2O75896 110 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 RNASE1P07998 156 aaKnown RBP9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 CSF1P09603 554 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 TBPP20226 339 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 CD1BP29016 333 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 HRH1P35367 487 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 TAS2R19P59542 299 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 HERV-K104P61576 105 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 DIAPH2-AS1Q14236 149 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 LY6EQ16553 131 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 RNASE10Q5GAN6 216 aaKnown RBP9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 LIAT1Q6ZQX7 453 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 ZNF833PQ6ZTB9 187 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 TMEM17Q86X19 198 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 ODF3L1Q8IXM7 274 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 DRAM1Q8N682 238 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 PIFOQ8TCI5 191 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 THAP7Q9BT49 309 aaPredicted RBP9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 RAB18Q9NP72 206 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 VPREB3Q9UKI3 123 aa9.59□□□□□ -0.87
SPTLC1-202ENST00000337841 SAA2-SAA4A0A096LPE2 208 aa9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 A0A1W2PPI3 338 aa9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 SAA2P0DJI9 122 aaPredicted RBP9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 AADACP22760 399 aa9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 MC5RP33032 325 aa9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 ZNF45Q02386 682 aa9.58□□□□□ -0.88
SPTLC1-202ENST00000337841 HES1Q14469 280 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms