RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 FAM214BQ7L5A3 538 aa14.8□□□□□ -0.04
GABRB3-202ENST00000311550 OPN3Q9H1Y3 402 aaPredicted RBP14.8□□□□□ -0.04
GABRB3-202ENST00000311550 COLQQ9Y215 455 aaPredicted RBP14.8□□□□□ -0.04
GABRB3-202ENST00000311550 PPIHO43447 177 aaKnown RBP14.8□□□□□ -0.04
GABRB3-202ENST00000311550 PTBP3O95758 552 aaKnown RBP14.8□□□□□ -0.04
GABRB3-202ENST00000311550 CD1BP29016 333 aa14.8□□□□□ -0.04
GABRB3-202ENST00000311550 MRPL54Q6P161 138 aaKnown RBP14.8□□□□□ -0.04
GABRB3-202ENST00000311550 DPPA3Q6W0C5 159 aa14.8□□□□□ -0.04
GABRB3-202ENST00000311550 LRP11Q86VZ4 500 aa14.8□□□□□ -0.04
GABRB3-202ENST00000311550 HARBI1Q96MB7 349 aa14.8□□□□□ -0.04
GABRB3-202ENST00000311550 SAP30LQ9HAJ7 183 aa14.8□□□□□ -0.04
GABRB3-202ENST00000311550 ASXL3Q9C0F0 2248 aa14.8□□□□□ -0.04
GABRB3-202ENST00000311550 RANP62826 216 aaKnown RBP14.8□□□□□ -0.04
GABRB3-202ENST00000311550 FAM162BQ5T6X4 162 aa14.8□□□□□ -0.04
GABRB3-202ENST00000311550 NKX2-8O15522 239 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 ETFRF1Q6IPR1 90 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 GDF15Q99988 308 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 RTBDNQ9BSG5 229 aaPredicted RBP14.79□□□□□ -0.04
GABRB3-202ENST00000311550 PRDM14Q9GZV8 571 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 RBKSQ9H477 322 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FAM90A10PA6NDY2 464 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FAM90A18PA6NE21 464 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FAM90A16PA6NEW6 464 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FAM90A20PA6NIJ5 464 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FAM90A8PA6NJQ4 464 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FAM90A7PA6NKC0 464 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FAM90A22PA8MWA6 464 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FAM90A12PA8MX19 464 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FAM90A5PA8MXJ8 464 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FAM90A23PA8MXZ1 464 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FAM157AC9JC47 383 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FAM90A15PP0C7V4 464 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FAM90A13PP0C7W8 464 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FAM90A14PP0C7W9 464 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FAM90A24PP0C7X0 464 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 DANCRP0C864 163 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 FOSL1P15407 271 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 POM121Q96HA1 1249 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 OR4C12Q96R67 309 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 TGIF2LXQ8IUE1 241 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 KLHDC3Q9BQ90 382 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 SMDT1Q9H4I9 107 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 VAMP3Q15836 100 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 TEPPQ6URK8 271 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 ZNF552Q9H707 407 aaPredicted RBP14.79□□□□□ -0.04
GABRB3-202ENST00000311550 IL17BQ9UHF5 180 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 PRDM6Q9NQX0 595 aa14.79□□□□□ -0.04
GABRB3-202ENST00000311550 A8MXK9 166 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 PDE6DO43924 150 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 SRSF10O75494 262 aaKnown RBP14.78□□□□□ -0.04
GABRB3-202ENST00000311550 IGLV3-19P01714 112 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 PPP1R32Q7Z5V6 425 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 OR4F17Q8NGA8 305 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 ZNF253O75346 499 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 FCER1GP30273 86 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 A0A0G2JMM0 328 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 A0A1W2PPB8 328 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 A0A1W2PRS3 328 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 KIR3DP1A8MWS1 328 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 J3QR06 171 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 CELA3AP09093 270 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 CCL8P80075 99 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 AAMDCQ9H7C9 122 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 SRD5A3Q9H8P0 318 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 K7ESF4 209 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 HOXA6P31267 233 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 OR1L6Q8NGR2 347 aa14.78□□□□□ -0.04
GABRB3-202ENST00000311550 SEBOXQ9HB31 216 aaPredicted RBP14.78□□□□□ -0.04
GABRB3-202ENST00000311550 HSPB1P04792 205 aaKnown RBP14.77□□□□□ -0.04
GABRB3-202ENST00000311550 LY6G6FQ5SQ64 297 aa14.77□□□□□ -0.04
GABRB3-202ENST00000311550 TAF15Q92804 592 aaKnown RBP eCLIP14.77□□□□□ -0.04
GABRB3-202ENST00000311550 ZIC3O60481 467 aa14.77□□□□□ -0.04
GABRB3-202ENST00000311550 CXorf1O96002 111 aa14.77□□□□□ -0.04
GABRB3-202ENST00000311550 IER3P46695 156 aa14.77□□□□□ -0.04
GABRB3-202ENST00000311550 TMEM183BQ1AE95 376 aa14.77□□□□□ -0.04
GABRB3-202ENST00000311550 FA2HQ7L5A8 372 aa14.77□□□□□ -0.04
GABRB3-202ENST00000311550 CALHM1Q8IU99 346 aa14.77□□□□□ -0.04
GABRB3-202ENST00000311550 VSTM2AQ8TAG5 236 aa14.77□□□□□ -0.04
GABRB3-202ENST00000311550 SLC25A28Q96A46 364 aa14.77□□□□□ -0.04
GABRB3-202ENST00000311550 PRNDQ9UKY0 176 aa14.77□□□□□ -0.04
GABRB3-202ENST00000311550 TGIF2-C20orf24A0A0A6YYL0 155 aa14.77□□□□□ -0.04
GABRB3-202ENST00000311550 ZNF785A8K8V0 405 aa14.77□□□□□ -0.04
GABRB3-202ENST00000311550 PDPNQ86YL7 162 aa14.77□□□□□ -0.04
GABRB3-202ENST00000311550 PITPNC1Q9UKF7 332 aa14.77□□□□□ -0.04
GABRB3-202ENST00000311550 LOC390937A0A1W2PQ73 354 aa14.77□□□□□ -0.05
GABRB3-202ENST00000311550 HELTA6NFD8 242 aa14.77□□□□□ -0.05
GABRB3-202ENST00000311550 MEF2BQ02080 365 aaPredicted RBP14.77□□□□□ -0.05
GABRB3-202ENST00000311550 ZNF645Q8N7E2 425 aa14.77□□□□□ -0.05
GABRB3-202ENST00000311550 NFAM1Q8NET5 270 aaPredicted RBP14.77□□□□□ -0.05
GABRB3-202ENST00000311550 IGHV3-21A0A0B4J1V1 117 aa14.76□□□□□ -0.05
GABRB3-202ENST00000311550 CYB5R3P00387 301 aaPredicted RBP14.76□□□□□ -0.05
GABRB3-202ENST00000311550 HPRT1P00492 218 aa14.76□□□□□ -0.05
GABRB3-202ENST00000311550 PRRX1P54821 245 aa14.76□□□□□ -0.05
GABRB3-202ENST00000311550 OR2V2Q96R30 315 aa14.76□□□□□ -0.05
GABRB3-202ENST00000311550 CCL13Q99616 98 aa14.76□□□□□ -0.05
GABRB3-202ENST00000311550 KCNMB2Q9Y691 235 aa14.76□□□□□ -0.05
GABRB3-202ENST00000311550 MYLKQ15746 1914 aa14.76□□□□□ -0.05
GABRB3-202ENST00000311550 FREM3P0C091 2139 aa14.76□□□□□ -0.05
GABRB3-202ENST00000311550 NDUFB4O95168 129 aa14.76□□□□□ -0.05
GABRB3-202ENST00000311550 USF1P22415 310 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms