RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 RAB40CQ96S21 281 aa9.71□□□□□ -0.86
PTPN2-201ENST00000309660 PSG11Q9UQ72 335 aa9.71□□□□□ -0.86
PTPN2-201ENST00000309660 DCHS1Q96JQ0 3298 aa9.71□□□□□ -0.86
PTPN2-201ENST00000309660 hCG_1809904A0A1W2PP81 198 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 A0A1W2PR64 198 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 A0A1W2PRV1 198 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 IGKV3-15P01624 115 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 RAB13P51153 203 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 EDDM3BP56851 147 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 RPL30P62888 115 aaKnown RBP9.7□□□□□ -0.86
PTPN2-201ENST00000309660 ADAM5Q6NVV9 412 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 COMMD1Q8N668 190 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 AKAP13Q12802 2813 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 IGHV1-18A0A0C4DH31 117 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 UBE2L5PA0A1B0GUS4 154 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 AQP7O14520 342 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 DFFBO76075 338 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 OR2B8PP59922 312 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 Q3ZCU0 254 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 ACP7Q6ZNF0 438 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 SSX9Q7RTT3 188 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 LFNGQ8NES3 379 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 OR13A1Q8NGR1 328 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 COQ2Q96H96 371 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 VSIRQ9H7M9 311 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 CLN8Q9UBY8 286 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 SH3BGRL2Q9UJC5 107 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 URGCP-MRPS24S4R325 110 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 IGHV2OR16-5A0A0B4J2B6 119 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 CLEC18AA5D8T8 446 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 TMEM210A6NLX4 147 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.7□□□□□ -0.86
PTPN2-201ENST00000309660 J3QW42 95 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 SPRY3O43610 288 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 BHLHA15Q7RTS1 189 aaPredicted RBP9.7□□□□□ -0.86
PTPN2-201ENST00000309660 C11orf53Q8IXP5 236 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 CLEC18CQ8NCF0 446 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 MBNL3Q9NUK0 354 aaKnown RBP9.7□□□□□ -0.86
PTPN2-201ENST00000309660 GNG12Q9UBI6 72 aa9.7□□□□□ -0.86
PTPN2-201ENST00000309660 S1PR2O95136 353 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 TAS2R30P59541 319 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 TLE4Q04727 773 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 HMGN3Q15651 99 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 SMIM21Q3B7S5 101 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 FAM201AQ5SY85 155 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 ZNF295-AS1Q8N0V1 137 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 STARD4Q96DR4 205 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 IFT22Q9H7X7 185 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 ANKRD11Q6UB99 2663 aaPredicted RBP9.69□□□□□ -0.86
PTPN2-201ENST00000309660 POLEQ07864 2286 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 TPRP12270 2363 aaKnown RBP9.69□□□□□ -0.86
PTPN2-201ENST00000309660 ZNF292O60281 2723 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 COLCA2A8K830 154 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 C17orf98A8MV24 154 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 S100A6P06703 90 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 RAB2AP61019 212 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 SPSB3Q6PJ21 355 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 CYB561D1Q8N8Q1 229 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 SCRT1Q9BWW7 348 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 WSB1Q9Y6I7 421 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 NBASA2RRP1 2371 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 CEP295Q9C0D2 2601 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 OOEPA6NGQ2 149 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 TNFSF13O75888 250 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 CD55P08174 381 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 UBE2KP61086 200 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 DEFB108BQ8NET1 73 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 RBMXL1Q96E39 390 aaKnown RBP9.69□□□□□ -0.86
PTPN2-201ENST00000309660 RPRMQ9NS64 109 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 DKK4Q9UBT3 224 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 WIPI2Q9Y4P8 454 aa9.69□□□□□ -0.86
PTPN2-201ENST00000309660 ZNF727A8MUV8 499 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 COX5AP20674 150 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 HBG1P69891 147 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 HBG2P69892 147 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 ZNF645Q8N7E2 425 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 RNF212BA8MTL3 300 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 KIAA1324LA8MWY0 1029 aaPredicted RBP9.68□□□□□ -0.86
PTPN2-201ENST00000309660 KLK10O43240 276 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 RAB5BP61020 215 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 RAB11AP62491 216 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 CATR1Q13166 79 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 ZNRF1Q8ND25 227 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 HIST1H2BAQ96A08 127 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 S100PBPQ96BU1 408 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 ZNF665Q9H7R5 613 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 ZNF71Q9NQZ8 489 aaPredicted RBP9.68□□□□□ -0.86
PTPN2-201ENST00000309660 MMP24Q9Y5R2 645 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 ATMQ13315 3056 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 C1orf196B1AJZ1 125 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 MMP9P14780 707 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 EGR1P18146 543 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 SNRPEP62304 92 aaKnown RBP9.68□□□□□ -0.86
PTPN2-201ENST00000309660 LSM10Q969L4 123 aaKnown RBP9.68□□□□□ -0.86
PTPN2-201ENST00000309660 OR4C12Q96R67 309 aa9.68□□□□□ -0.86
PTPN2-201ENST00000309660 CEBPZOSA8MTT3 80 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 BMP5P22003 454 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 PRDX2P32119 198 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 SLC38A11Q08AI6 406 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms