RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 CTLA4P16410 223 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 FZD5Q13467 585 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 PRSS54Q6PEW0 395 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 C1orf210Q8IVY1 113 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 C1orf174Q8IYL3 243 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 RAB33BQ9H082 229 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 Q9N2K0 584 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 DOCK5Q9H7D0 1870 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 A0A1W2PQM1 296 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 HMSDA8MTL9 139 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 MPV17LQ2QL34 196 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 FUT9Q9Y231 359 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 TOGARAM1Q9Y4F4 1720 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 CA11O75493 328 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 CTAG2O75638 210 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 ZBTB34Q8NCN2 500 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 TMEM70Q9BUB7 260 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 OR51B2Q9Y5P1 312 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 PKD1L3Q7Z443 1732 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 A1L4Q6 167 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 PLPP3O14495 311 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 RPS4XP62701 263 aaKnown RBP10.57□□□□□ -0.72
PCF11-201ENST00000298281 ZNF770Q6IQ21 691 aaPredicted RBP10.57□□□□□ -0.72
PCF11-201ENST00000298281 SLC35E3Q7Z769 313 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 PTP4A1Q93096 173 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 ZNF107Q9UII5 783 aaPredicted RBP10.57□□□□□ -0.72
PCF11-201ENST00000298281 ITGB4P16144 1822 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 TRGV2A0A075B6R0 118 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 PGPA6NDG6 321 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 C21orf140B9A014 251 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 EPHA8P29322 1005 aaPredicted RBP10.57□□□□□ -0.72
PCF11-201ENST00000298281 MRM1Q6IN84 353 aaKnown RBP10.57□□□□□ -0.72
PCF11-201ENST00000298281 OR5A1Q8NGJ0 315 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 LSM10Q969L4 123 aaKnown RBP10.57□□□□□ -0.72
PCF11-201ENST00000298281 PRSS27Q9BQR3 290 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 ANOS1P23352 680 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 TMEM249Q2WGJ8 235 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 MTURNQ8N3F0 131 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 PGLYRP4Q96LB8 373 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 PLCH1Q4KWH8 1693 aa10.57□□□□□ -0.72
PCF11-201ENST00000298281 ERGP11308 486 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 HMGA2P52926 109 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 C19orf48Q6RUI8 117 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 HMGCLL1Q8TB92 370 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 ZNF714Q96N38 554 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 ALPK2Q86TB3 2170 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 TRDCB7Z8K6 153 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 NKX2-8O15522 239 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 PGFP49763 221 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 ATP5G2Q06055 141 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 ZNF415Q09FC8 603 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 GTSCR1Q86UQ5 136 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 MRPL20Q9BYC9 149 aaKnown RBP10.56□□□□□ -0.72
PCF11-201ENST00000298281 MS4A5Q9H3V2 200 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 IGHV3OR16-10A0A075B7F0 116 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 C1QTNF9BB2RNN3 333 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 PPM1DO15297 605 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 MPC2O95563 127 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 OR10J1P30954 320 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 C3AR1Q16581 482 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 FAM74A3Q4VXF1 159 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 TMEM160Q9NX00 188 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 ELOA3CA0A087WX78 387 aaPredicted RBP10.56□□□□□ -0.72
PCF11-201ENST00000298281 CEACAM4O75871 244 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 TGFAP01135 160 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 IGHV5-51A0A0C4DH38 117 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 PPP1R1AQ13522 171 aa10.56□□□□□ -0.72
PCF11-201ENST00000298281 CTSDP07339 412 aaPredicted RBP10.55□□□□□ -0.72
PCF11-201ENST00000298281 LTBRP36941 435 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 TTC9CQ8N5M4 171 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 CST9LQ9H4G1 147 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 TMEM30AQ9NV96 361 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 AURKAIP1Q9NWT8 199 aaPredicted RBP10.55□□□□□ -0.72
PCF11-201ENST00000298281 IL36RNQ9UBH0 155 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.55□□□□□ -0.72
PCF11-201ENST00000298281 A0A1W2PQD3 144 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 MRPL30Q8TCC3 161 aaKnown RBP10.55□□□□□ -0.72
PCF11-201ENST00000298281 RNASEH2CQ8TDP1 164 aaKnown RBP10.55□□□□□ -0.72
PCF11-201ENST00000298281 SLC52A3Q9NQ40 469 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 ATRXP46100 2492 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 MUC4Q99102 2169 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 TMEM210A6NLX4 147 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 LHBP01229 141 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 FMODQ06828 376 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 SLC23A3Q6PIS1 610 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 LINC00596Q86U02 117 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 SMOC1Q9H4F8 434 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 PRNDQ9UKY0 176 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 HSF4Q9ULV5 492 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 J3QR06 171 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 RPL31P62899 125 aaKnown RBP10.55□□□□□ -0.72
PCF11-201ENST00000298281 SH2D5Q6ZV89 423 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 WDFY1Q8IWB7 410 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 OR2K2Q8NGT1 345 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 SLIRPQ9GZT3 109 aaKnown RBP10.55□□□□□ -0.72
PCF11-201ENST00000298281 OPN4Q9UHM6 478 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 GDF9O60383 454 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 OR2Y1Q8NGV0 311 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 HSPB7Q9UBY9 170 aa10.55□□□□□ -0.72
PCF11-201ENST00000298281 OVCH2Q7RTZ1 564 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms