RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 TRIM77I1YAP6 450 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 K7N7A8 449 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 IGHV3-43DP0DP04 118 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 PTAFRP25105 342 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 ARHGDIBP52566 201 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 FAM53AQ6NSI3 398 aaPredicted RBP10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 ATRAIDQ6UW56 229 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 SSX8Q7RTT4 187 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 ZGRF1Q86YA3 2104 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 ODF3L1Q8IXM7 274 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 SVBPQ8N300 66 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 FGFRL1Q8N441 504 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 TMEM217Q8N7C4 229 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 EDARADDQ8WWZ3 215 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 C5orf30Q96GV9 206 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 DCTN5Q9BTE1 182 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 NKX6-2Q9C056 277 aaPredicted RBP10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 COA4Q9NYJ1 87 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 RNF7Q9UBF6 113 aa10.79□□□□□ -0.68
SPTLC1-201ENST00000262554 RNASEK-C17orf49H0YIS7 233 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 AGPAT2O15120 278 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 TXNL1O43396 289 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 DFFBO76075 338 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 IGHV1-46P01743 117 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 MUC1P15941 1255 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 ATP6V0CP27449 155 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 ID4P47928 161 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 SULT1A1P50225 295 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 RBPJQ06330 500 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 C10orf91Q5T1B1 145 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 ZNF66Q6ZN08 573 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 TMEM182Q6ZP80 229 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 WFDC8Q8IUA0 241 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 OR2G3Q8NGZ4 309 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 FAM216AQ8WUB2 273 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 TCTEX1D2Q8WW35 142 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 SNRNP40Q96DI7 357 aaKnown RBP10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 GNPNAT1Q96EK6 184 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 HSD17B10Q99714 261 aaKnown RBP10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 ATP5SQ99766 215 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 SEC11CQ9BY50 192 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 C19orf12Q9NSK7 152 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 JKAMPQ9P055 326 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 JPT1Q9UK76 154 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 PSG11Q9UQ72 335 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 CARHSP1Q9Y2V2 147 aaKnown RBP10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 FAM96BQ9Y3D0 163 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 MSRB2Q9Y3D2 182 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 CADP27708 2225 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 PTPRZ1P23471 2315 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 DEFB108AA8MXU0 73 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 UMAD1C9J7I0 102 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 FAM90A26D6RGX4 464 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 TOR1AO14656 332 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 CLDN1O95832 211 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 ADCYAP1P18509 176 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 DVL1P1P54792 670 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 RPL30P62888 115 aaKnown RBP10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 CR1LQ2VPA4 569 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 MIDNQ504T8 468 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 BTNL3Q6UXE8 466 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 ZNF295-AS1Q8N0V1 137 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 ZNF561Q8N587 486 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 ZNRF1Q8ND25 227 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 FAM222BQ8WU58 562 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 C17orf50Q8WW18 174 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 GCM1Q9NP62 436 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 PSENENQ9NZ42 101 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 MGAQ8IWI9 3026 aa10.78□□□□□ -0.68
SPTLC1-201ENST00000262554 CACNA1DQ01668 2161 aa10.77□□□□□ -0.68
SPTLC1-201ENST00000262554 BOD1L1Q8NFC6 3051 aa10.77□□□□□ -0.68
SPTLC1-201ENST00000262554 MEX3AA1L020 520 aaKnown RBP10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 H3BP45 60 aa10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 ST8SIA5O15466 376 aa10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 RAMP3O60896 148 aa10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 CD5P06127 495 aa10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 CD80P33681 288 aa10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 EDDM3BP56851 147 aa10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 TAS2R30P59541 319 aa10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 ZNF816Q0VGE8 651 aaPredicted RBP10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 LTC4SQ16873 150 aa10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 Q3ZCU0 254 aa10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 OR2B11Q5JQS5 317 aa10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 NCOR1P1Q9H4R4 102 aa10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 RAB9BQ9NP90 201 aa10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 OR6C3Q9NZP0 311 aa10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 GNG12Q9UBI6 72 aa10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 LAMP3Q9UQV4 416 aa10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 SPENQ96T58 3664 aaKnown RBP10.77□□□□□ -0.69
SPTLC1-201ENST00000262554 C17orf98A8MV24 154 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 TSPAN4O14817 238 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 YPEL1O60688 119 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 KRASP01116 189 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 IFNA5P01569 189 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 IAPPP10997 89 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 G6PCP35575 357 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 SNCAP37840 140 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 FHITP49789 147 aa10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 TMEM267Q0VDI3 215 aaPredicted RBP10.76□□□□□ -0.69
SPTLC1-201ENST00000262554 MORN2Q502X0 79 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms