RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 GHITMQ9H3K2 345 aa13.86□□□□□ -0.19
SMN2-213ENST00000614240 CLEC2DQ9UHP7 191 aa13.86□□□□□ -0.19
SMN2-213ENST00000614240 JPT1Q9UK76 154 aa13.86□□□□□ -0.19
SMN2-213ENST00000614240 DIMT1Q9UNQ2 313 aaKnown RBP13.86□□□□□ -0.19
SMN2-213ENST00000614240 CAPGP40121 348 aa13.85□□□□□ -0.19
SMN2-213ENST00000614240 OR3A3P47888 321 aa13.85□□□□□ -0.19
SMN2-213ENST00000614240 ZNF554Q86TJ5 538 aa13.85□□□□□ -0.19
SMN2-213ENST00000614240 ABHD5Q8WTS1 349 aa13.85□□□□□ -0.19
SMN2-213ENST00000614240 DLX4Q92988 240 aaPredicted RBP13.85□□□□□ -0.19
SMN2-213ENST00000614240 GALMQ96C23 342 aa13.85□□□□□ -0.19
SMN2-213ENST00000614240 TMEM80Q96HE8 168 aa13.85□□□□□ -0.19
SMN2-213ENST00000614240 RDH12Q96NR8 316 aa13.85□□□□□ -0.19
SMN2-213ENST00000614240 CST11Q9H112 138 aa13.85□□□□□ -0.19
SMN2-213ENST00000614240 ALX4Q9H161 411 aaPredicted RBP13.85□□□□□ -0.19
SMN2-213ENST00000614240 S100A14Q9HCY8 104 aa13.85□□□□□ -0.19
SMN2-213ENST00000614240 SMPD3Q9NY59 655 aaPredicted RBP13.85□□□□□ -0.19
SMN2-213ENST00000614240 TRBV5-7A0A0A0MS05 114 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 PNMA8CA0A1B0GUJ8 204 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 A0A1W2PN81 502 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 LINC01619G3V211 115 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 PDCD6O75340 191 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 SC5DO75845 299 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 SPNP16150 400 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 CHRNA7P36544 502 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 SLURP1P55000 103 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 RPS11P62280 158 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMN2-213ENST00000614240 HTD2P86397 168 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 PLGLAQ15195 96 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 CASC10Q5T4H9 136 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 C5orf24Q7Z6I8 188 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 CDH26Q8IXH8 852 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 ODF3L1Q8IXM7 274 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 PQLC1Q8N2U9 271 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 MINDY2Q8NBR6 621 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 OR2AK2Q8NG84 335 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 FAM46BQ96A09 425 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 Q96M66 194 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 NEDD4LQ96PU5 975 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 ZMAT4Q9H898 229 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 PALMDQ9NP74 551 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 MBNL3Q9NUK0 354 aaKnown RBP13.84□□□□□ -0.19
SMN2-213ENST00000614240 ABRACLQ9P1F3 81 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 LRRC42Q9Y546 428 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 A3GALT2U3KPV4 340 aa13.84□□□□□ -0.19
SMN2-213ENST00000614240 SAA2-SAA4A0A096LPE2 208 aa13.83□□□□□ -0.2
SMN2-213ENST00000614240 YPEL1O60688 119 aa13.83□□□□□ -0.2
SMN2-213ENST00000614240 BAG2O95816 211 aa13.83□□□□□ -0.2
SMN2-213ENST00000614240 FRMD6-AS1P0C7T7 363 aa13.83□□□□□ -0.2
SMN2-213ENST00000614240 SAA2P0DJI9 122 aaPredicted RBP13.83□□□□□ -0.2
SMN2-213ENST00000614240 SIGIRRQ6IA17 410 aa13.83□□□□□ -0.2
SMN2-213ENST00000614240 ZNF833PQ6ZTB9 187 aa13.83□□□□□ -0.2
SMN2-213ENST00000614240 NPBQ8NG41 125 aa13.83□□□□□ -0.2
SMN2-213ENST00000614240 OR6Q1Q8NGQ2 317 aa13.83□□□□□ -0.2
SMN2-213ENST00000614240 MRPL30Q8TCC3 161 aaKnown RBP13.83□□□□□ -0.2
SMN2-213ENST00000614240 IL1F10Q8WWZ1 152 aa13.83□□□□□ -0.2
SMN2-213ENST00000614240 PGLYRP3Q96LB9 341 aa13.83□□□□□ -0.2
SMN2-213ENST00000614240 YPEL2Q96QA6 119 aa13.83□□□□□ -0.2
SMN2-213ENST00000614240 STEAP1Q9UHE8 339 aa13.83□□□□□ -0.2
SMN2-213ENST00000614240 FOXA2Q9Y261 457 aaPredicted RBP13.83□□□□□ -0.2
SMN2-213ENST00000614240 LYL1P12980 280 aa13.82□□□□□ -0.2
SMN2-213ENST00000614240 GP9P14770 177 aa13.82□□□□□ -0.2
SMN2-213ENST00000614240 TAS2R43P59537 309 aa13.82□□□□□ -0.2
SMN2-213ENST00000614240 DOC2BQ14184 412 aa13.82□□□□□ -0.2
SMN2-213ENST00000614240 ZNF660Q6AZW8 331 aaPredicted RBP13.82□□□□□ -0.2
SMN2-213ENST00000614240 NKAIN3Q8N8D7 197 aa13.82□□□□□ -0.2
SMN2-213ENST00000614240 CASTOR1Q8WTX7 329 aa13.82□□□□□ -0.2
SMN2-213ENST00000614240 ARPC1AQ92747 370 aa13.82□□□□□ -0.2
SMN2-213ENST00000614240 OR4C12Q96R67 309 aa13.82□□□□□ -0.2
SMN2-213ENST00000614240 FBXL15Q9H469 300 aa13.82□□□□□ -0.2
SMN2-213ENST00000614240 STAB2Q8WWQ8 2551 aa13.81□□□□□ -0.2
SMN2-213ENST00000614240 NDUFA3O95167 84 aa13.81□□□□□ -0.2
SMN2-213ENST00000614240 GSTP1P09211 210 aaKnown RBP13.81□□□□□ -0.2
SMN2-213ENST00000614240 LGALS1P09382 135 aaKnown RBP13.81□□□□□ -0.2
SMN2-213ENST00000614240 TMEM267Q0VDI3 215 aaPredicted RBP13.81□□□□□ -0.2
SMN2-213ENST00000614240 FAM131AQ6UXB0 335 aa13.81□□□□□ -0.2
SMN2-213ENST00000614240 CYGBQ8WWM9 190 aa13.81□□□□□ -0.2
SMN2-213ENST00000614240 CYYR1Q96J86 154 aa13.81□□□□□ -0.2
SMN2-213ENST00000614240 DERL3Q96Q80 235 aa13.81□□□□□ -0.2
SMN2-213ENST00000614240 TOLLIPQ9H0E2 274 aa13.81□□□□□ -0.2
SMN2-213ENST00000614240 CHMP1AQ9HD42 196 aaPredicted RBP13.81□□□□□ -0.2
SMN2-213ENST00000614240 GHRLQ9UBU3 117 aa13.81□□□□□ -0.2
SMN2-213ENST00000614240 RNF150Q9ULK6 438 aa13.81□□□□□ -0.2
SMN2-213ENST00000614240 IGHV4OR15-8A0A075B7B6 117 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 A0A087WW49 117 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 RRHO14718 337 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 ST8SIA5O15466 376 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 OR8U9P0C7N5 309 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 MAPK3P27361 379 aaPredicted RBP13.8□□□□□ -0.2
SMN2-213ENST00000614240 CD40LGP29965 261 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 CX3CL1P78423 397 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 PITPNAQ00169 270 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 NDPQ00604 133 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 ST3GAL4Q11206 333 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 LRRC36Q1X8D7 754 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 LY6G6FQ5SQ64 297 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 ACSM6Q6P461 480 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 TCTEX1D1Q8N7M0 179 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 SETD9Q8NE22 299 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 SETD6Q8TBK2 473 aa13.8□□□□□ -0.2
SMN2-213ENST00000614240 FLYWCH2Q96CP2 140 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms