RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 OR2S2Q9NQN1 319 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 PRR13Q9NZ81 148 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 RBM7Q9Y580 266 aaKnown RBP7.4□□□□□ -1.22
CCDC47-207ENST00000612558 RAI1Q7Z5J4 1906 aaPredicted RBP7.39□□□□□ -1.23
CCDC47-207ENST00000612558 C13orf42A0A1B0GVH6 325 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 A0A1B0GW55 424 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 PHF1O43189 567 aaPredicted RBP7.39□□□□□ -1.23
CCDC47-207ENST00000612558 PGLYRP1O75594 196 aaPredicted RBP7.39□□□□□ -1.23
CCDC47-207ENST00000612558 ADAP1O75689 374 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 FSTL3O95633 263 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 IFNA21P01568 189 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 DANCRP0C864 163 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 DUX4L2P0CJ85 424 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 DUX4L3P0CJ86 424 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 DUX4L4P0CJ87 422 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 DUX4L5P0CJ88 424 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 DUX4L6P0CJ89 424 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 DUX4L7P0CJ90 424 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 CGB3P0DN86 165 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 CGB7P0DN87 165 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 SRPXP78539 464 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 SP6Q3SY56 376 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 LCE1DQ5T752 114 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 LAMTOR1Q6IAA8 161 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 DUX4L9Q6RFH8 374 aaPredicted RBP7.39□□□□□ -1.23
CCDC47-207ENST00000612558 DTX2Q86UW9 622 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 LGI3Q8N145 548 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 C9orf62Q8N4C0 152 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 RFESDQ8TAC1 157 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 GLYATL2Q8WU03 294 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 NMES1Q9C002 83 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 COMMD9Q9P000 198 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 DUX4Q9UBX2 424 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 SLC25A10Q9UBX3 287 aaPredicted RBP7.39□□□□□ -1.23
CCDC47-207ENST00000612558 HSPB11Q9Y547 144 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 DOPEY1Q5JWR5 2465 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 ARID1AO14497 2285 aa7.39□□□□□ -1.23
CCDC47-207ENST00000612558 TRGV10A0A0A0MS01 117 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 HMSDA8MTL9 139 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 F2RL2O00254 374 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 ADAM20O43506 726 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 B3GALNT1O75752 331 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 GOSR1O95249 250 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 SOD3P08294 240 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 HOXB5P09067 269 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 WNT2P09544 360 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 OR8U9P0C7N5 309 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 COL8A2P25067 703 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 MRPS11P82912 194 aaKnown RBP7.38□□□□□ -1.23
CCDC47-207ENST00000612558 MSMO1Q15800 293 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 ZBTB8BQ8NAP8 495 aaPredicted RBP7.38□□□□□ -1.23
CCDC47-207ENST00000612558 ZBTB34Q8NCN2 500 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 OR8U1Q8NH10 309 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 FAM216AQ8WUB2 273 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 NEU4Q8WWR8 484 aaPredicted RBP7.38□□□□□ -1.23
CCDC47-207ENST00000612558 CORO2AQ92828 525 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 MSI2Q96DH6 328 aaKnown RBP7.38□□□□□ -1.23
CCDC47-207ENST00000612558 C18orf12Q96KH6 178 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 C2orf50Q96LR7 162 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 TP53RKQ96S44 253 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 TMEM222Q9H0R3 208 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 CALYQ9NYX4 217 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 KAAG1Q9UBP8 84 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 JPT1Q9UK76 154 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 UBE2J1Q9Y385 318 aaPredicted RBP7.38□□□□□ -1.23
CCDC47-207ENST00000612558 ZNF462Q96JM2 2506 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 USF3Q68DE3 2245 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 MYO18BQ8IUG5 2567 aa7.38□□□□□ -1.23
CCDC47-207ENST00000612558 PIGBOS1A0A0B4J2F0 54 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 KBTBD11-OT1A0A1B0GTJ5 212 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 A0A1W2PPR1 153 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 hADV38S2A0JD32 116 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 MEX3AA1L020 520 aaKnown RBP7.37□□□□□ -1.23
CCDC47-207ENST00000612558 ZNF729A6NN14 1252 aaPredicted RBP7.37□□□□□ -1.23
CCDC47-207ENST00000612558 A6NNC1 897 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 H0Y980 276 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 NDUFB3O43676 98 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 YPEL1O60688 119 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 C1QL1O75973 258 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 IGLV2-14P01704 120 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 NDUFB7P17568 137 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 F2RP25116 425 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 PPP1CCP36873 323 aaKnown RBP7.37□□□□□ -1.23
CCDC47-207ENST00000612558 MEF2CQ06413 473 aaPredicted RBP7.37□□□□□ -1.23
CCDC47-207ENST00000612558 GNMTQ14749 295 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 C17orf58Q2M2W7 97 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 LGALSLQ3ZCW2 172 aaPredicted RBP7.37□□□□□ -1.23
CCDC47-207ENST00000612558 LRRC10Q5BKY1 277 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 MEX3BQ6ZN04 569 aaKnown RBP7.37□□□□□ -1.23
CCDC47-207ENST00000612558 ZNF645Q8N7E2 425 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 GRPEL2Q8TAA5 225 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 PPP1R1CQ8WVI7 109 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 TMEM56Q96MV1 263 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 YPEL2Q96QA6 119 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 TMEM246Q9BRR3 403 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 PARP12Q9H0J9 701 aaKnown RBP7.37□□□□□ -1.23
CCDC47-207ENST00000612558 LINC00574Q9H8X3 128 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 PLSCR3Q9NRY6 295 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 GNG12Q9UBI6 72 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 CLN8Q9UBY8 286 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 879.6 ms