RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 FAM90A2PQ658T7 463 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 RNF144BQ7Z419 303 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 ABHD12BQ7Z5M8 362 aaPredicted RBP13.66□□□□□ -0.22
RTN1-209ENST00000611068 TMEM256Q8N2U0 113 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 TMEM178AQ8NBL3 297 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 ORAOV1Q8WV07 137 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 SF3B5Q9BWJ5 86 aaKnown RBP13.66□□□□□ -0.22
RTN1-209ENST00000611068 SLC7A10Q9NS82 523 aa13.66□□□□□ -0.22
RTN1-209ENST00000611068 GFRA3O60609 400 aa13.65□□□□□ -0.22
RTN1-209ENST00000611068 RPL23AP62750 156 aaKnown RBP13.65□□□□□ -0.22
RTN1-209ENST00000611068 RTP5Q14D33 572 aa13.65□□□□□ -0.22
RTN1-209ENST00000611068 OR13G1Q8NGZ3 307 aa13.65□□□□□ -0.22
RTN1-209ENST00000611068 OR2G3Q8NGZ4 309 aa13.65□□□□□ -0.22
RTN1-209ENST00000611068 TMEM170AQ8WVE7 144 aa13.65□□□□□ -0.22
RTN1-209ENST00000611068 PTGER4P35408 488 aa13.65□□□□□ -0.22
RTN1-209ENST00000611068 FDX2Q6P4F2 183 aa13.65□□□□□ -0.22
RTN1-209ENST00000611068 LHFPL4Q7Z7J7 247 aa13.65□□□□□ -0.22
RTN1-209ENST00000611068 NKAIN3Q8N8D7 197 aa13.65□□□□□ -0.22
RTN1-209ENST00000611068 OR8B12Q8NGG6 310 aa13.65□□□□□ -0.22
RTN1-209ENST00000611068 CLDND2Q8NHS1 167 aa13.65□□□□□ -0.22
RTN1-209ENST00000611068 ZCCHC14Q8WYQ9 949 aaKnown RBP13.65□□□□□ -0.22
RTN1-209ENST00000611068 ADAT3Q96EY9 351 aaPredicted RBP13.65□□□□□ -0.22
RTN1-209ENST00000611068 CIB3Q96Q77 187 aaPredicted RBP13.65□□□□□ -0.22
RTN1-209ENST00000611068 HHLA2Q9UM44 414 aa13.65□□□□□ -0.22
RTN1-209ENST00000611068 IGF2RP11717 2491 aa13.64□□□□□ -0.23
RTN1-209ENST00000611068 ZNF891A8MT65 544 aaPredicted RBP13.64□□□□□ -0.23
RTN1-209ENST00000611068 FPR2P25090 351 aa13.64□□□□□ -0.23
RTN1-209ENST00000611068 TUBD1Q9UJT1 453 aa13.64□□□□□ -0.23
RTN1-209ENST00000611068 PFN1P07737 140 aaKnown RBP13.64□□□□□ -0.23
RTN1-209ENST00000611068 C10orf128Q5T292 105 aa13.64□□□□□ -0.23
RTN1-209ENST00000611068 TECTBQ96PL2 329 aa13.64□□□□□ -0.23
RTN1-209ENST00000611068 PCGF1Q9BSM1 259 aa13.64□□□□□ -0.23
RTN1-209ENST00000611068 MCTS1Q9ULC4 181 aaKnown RBP13.64□□□□□ -0.23
RTN1-209ENST00000611068 CEACAM18A8MTB9 384 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 GPR137BO60478 399 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 CCL2P13500 99 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 IGFBP3P17936 291 aaPredicted RBP13.63□□□□□ -0.23
RTN1-209ENST00000611068 RSPO1Q2MKA7 263 aaPredicted RBP13.63□□□□□ -0.23
RTN1-209ENST00000611068 NICN1Q9BSH3 213 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 GPR84Q9NQS5 396 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 LOC102724200A0A096LPH7 203 aaPredicted RBP13.63□□□□□ -0.23
RTN1-209ENST00000611068 J3QW42 95 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 YPEL1O60688 119 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 ZNF32P17041 273 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 ATP6V0CP27449 155 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 FGF8P55075 233 aaPredicted RBP13.63□□□□□ -0.23
RTN1-209ENST00000611068 CST9LP1Q5W188 147 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 UNQ5815/PRO19632Q6UWF5 114 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 MCEMP1Q8IX19 187 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 GJC3Q8NFK1 279 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 WDYHV1Q96HA8 205 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 YPEL2Q96QA6 119 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 FOXB1Q99853 325 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 RBKSQ9H477 322 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 RHBDD3Q9Y3P4 386 aa13.63□□□□□ -0.23
RTN1-209ENST00000611068 E5RGE8 158 aa13.62□□□□□ -0.23
RTN1-209ENST00000611068 PROB1E7EW31 1015 aa13.62□□□□□ -0.23
RTN1-209ENST00000611068 DNPH1O43598 174 aa13.62□□□□□ -0.23
RTN1-209ENST00000611068 CCNOP22674 350 aa13.62□□□□□ -0.23
RTN1-209ENST00000611068 TMEM241Q24JQ0 296 aa13.62□□□□□ -0.23
RTN1-209ENST00000611068 SP5Q6BEB4 398 aaPredicted RBP13.62□□□□□ -0.23
RTN1-209ENST00000611068 OR2AE1Q8NHA4 323 aa13.62□□□□□ -0.23
RTN1-209ENST00000611068 TMEM38BQ9NVV0 291 aa13.62□□□□□ -0.23
RTN1-209ENST00000611068 MRPS28Q9Y2Q9 187 aaKnown RBP13.62□□□□□ -0.23
RTN1-209ENST00000611068 NSG2Q9Y328 171 aa13.62□□□□□ -0.23
RTN1-209ENST00000611068 HIST1H3AP68431 136 aa13.62□□□□□ -0.23
RTN1-209ENST00000611068 TPTE2P1Q5T6R2 138 aa13.62□□□□□ -0.23
RTN1-209ENST00000611068 TEX43Q6ZNM6 134 aa13.62□□□□□ -0.23
RTN1-209ENST00000611068 RNF2Q99496 336 aa13.62□□□□□ -0.23
RTN1-209ENST00000611068 PYGO2Q9BRQ0 406 aa13.62□□□□□ -0.23
RTN1-209ENST00000611068 PRSS50Q9UI38 385 aa13.62□□□□□ -0.23
RTN1-209ENST00000611068 RBMXP38159 391 aaKnown RBP13.61□□□□□ -0.23
RTN1-209ENST00000611068 SNAI3Q3KNW1 292 aa13.61□□□□□ -0.23
RTN1-209ENST00000611068 IGF2-ASQ6U949 168 aa13.61□□□□□ -0.23
RTN1-209ENST00000611068 C16orf82Q7Z2V1 217 aa13.61□□□□□ -0.23
RTN1-209ENST00000611068 SLC22A24Q8N4F4 322 aa13.61□□□□□ -0.23
RTN1-209ENST00000611068 TOMM40LQ969M1 308 aa13.61□□□□□ -0.23
RTN1-209ENST00000611068 REEP6Q96HR9 211 aa13.61□□□□□ -0.23
RTN1-209ENST00000611068 SDF2L1Q9HCN8 221 aa13.61□□□□□ -0.23
RTN1-209ENST00000611068 SH3BGRL2Q9UJC5 107 aa13.61□□□□□ -0.23
RTN1-209ENST00000611068 BSNQ9UPA5 3926 aa13.61□□□□□ -0.23
RTN1-209ENST00000611068 ZNF320A2RRD8 509 aa13.61□□□□□ -0.23
RTN1-209ENST00000611068 ARF1P84077 181 aaKnown RBP13.61□□□□□ -0.23
RTN1-209ENST00000611068 LINC01551Q86U37 167 aa13.61□□□□□ -0.23
RTN1-209ENST00000611068 CALHM1Q8IU99 346 aa13.61□□□□□ -0.23
RTN1-209ENST00000611068 SNIP1Q8TAD8 396 aaKnown RBP13.61□□□□□ -0.23
RTN1-209ENST00000611068 TAAR6Q96RI8 345 aa13.61□□□□□ -0.23
RTN1-209ENST00000611068 TUBG2Q9NRH3 451 aa13.61□□□□□ -0.23
RTN1-209ENST00000611068 C1orf123Q9NWV4 160 aa13.61□□□□□ -0.23
RTN1-209ENST00000611068 FIGNL2A6NMB9 653 aa13.6□□□□□ -0.23
RTN1-209ENST00000611068 HSPB2A8KAH6 182 aa13.6□□□□□ -0.23
RTN1-209ENST00000611068 TOMM40O96008 361 aa13.6□□□□□ -0.23
RTN1-209ENST00000611068 HLA-HP01893 362 aa13.6□□□□□ -0.23
RTN1-209ENST00000611068 CDKN1AP38936 164 aa13.6□□□□□ -0.23
RTN1-209ENST00000611068 IL24Q13007 206 aa13.6□□□□□ -0.23
RTN1-209ENST00000611068 HSPB2Q16082 182 aa13.6□□□□□ -0.23
RTN1-209ENST00000611068 ACTL10Q5JWF8 245 aa13.6□□□□□ -0.23
RTN1-209ENST00000611068 Q5PR19 223 aa13.6□□□□□ -0.23
RTN1-209ENST00000611068 VAX1Q5SQQ9 334 aa13.6□□□□□ -0.23
RTN1-209ENST00000611068 LDLRAD2Q5SZI1 272 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms