RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 J3QT63 122 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 HOXB1P14653 301 aaPredicted RBP5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 ZNF90Q03938 601 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 HGFACQ04756 655 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 RIPPLY2Q5TAB7 128 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 LRP11Q86VZ4 500 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 TMEM251Q8N6I4 163 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 WBP1Q96G27 269 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 RHOVQ96L33 236 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 LIME1Q9H400 295 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 RPH3ALQ9UNE2 315 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 PCNX1Q96RV3 2341 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 H0Y980 276 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 CTSSP25774 331 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 MPLP40238 635 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 UCP3P55916 312 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 STARD6P59095 220 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 PMS2P11Q13670 270 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 RNPS1Q15287 305 aaKnown RBP5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 FAM78BQ5VT40 261 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 PPP1R32Q7Z5V6 425 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 OR2Z1Q8NG97 314 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 OR52L2PQ8NGH6 319 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 SLC25A40Q8TBP6 338 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 MRPL30Q8TCC3 161 aaKnown RBP5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 ABHD14BQ96IU4 210 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 MEGF10Q96KG7 1140 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 UHRF2Q96PU4 802 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 TTTY12Q9BZ98 90 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 PRDM6Q9NQX0 595 aa5.88□□□□□ -1.47
SYNPO2-206ENST00000610556 NCOA6Q14686 2063 aaPredicted RBP5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 IGLV3-32A0A0A0MS00 114 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 PMS2P1A4D2B8 440 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 LINC01387J3KSC0 135 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 KLF7O75840 302 aaPredicted RBP5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 MBP02144 154 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 MMP7P09237 267 aaPredicted RBP5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 RPS2P15880 293 aaKnown RBP5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 EGR1P18146 543 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 NUFIP2Q7Z417 695 aaKnown RBP5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 UBALD2Q8IYN6 164 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 FGFRL1Q8N441 504 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 OR10A7Q8NGE5 316 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 DTD1Q8TEA8 209 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 CIB3Q96Q77 187 aaPredicted RBP5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 PILRBQ9UKJ0 227 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 FUT9Q9Y231 359 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 TICRRQ7Z2Z1 1910 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 KIF26AQ9ULI4 1882 aaPredicted RBP5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 A0A087X0M5 115 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 A0A1B0GX30 115 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 F6UZH7 168 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 ST8SIA5O15466 376 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 OR2H2O95918 312 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 HAND1O96004 215 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 MT-CO3P00414 261 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 HSPB1P04792 205 aaKnown RBP5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 PNRC1Q12796 327 aaPredicted RBP5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 ZNF718Q3SXZ3 478 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 DCAF10Q5QP82 559 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 MOB1BQ7L9L4 216 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 MRGPRGQ86SM5 289 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 H1FOOQ8IZA3 346 aaPredicted RBP5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 OR1L1Q8NH94 360 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 SSMEM1Q8WWF3 244 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 TMEM18Q96B42 140 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 MUCL1Q96DR8 90 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 C18orf12Q96KH6 178 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 GGACTQ9BVM4 153 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 OR51M1Q9H341 326 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 GLRX2Q9NS18 164 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 DEPPQ9NTK1 212 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 TREM2Q9NZC2 230 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 SPRY3O43610 288 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 OR7C2O60412 319 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 SRP19P09132 144 aaKnown RBP5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 CRYGSP22914 178 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 CDC34P49427 236 aaPredicted RBP5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 SPEM2Q0P670 501 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 ZNF766Q5HY98 468 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 Q8IYB0 196 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 WFIKKN1Q96NZ8 548 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 SIGLEC12Q96PQ1 595 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 S1PR3Q99500 378 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 TMEM147Q9BVK8 224 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 GPR87Q9BY21 358 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 RBKSQ9H477 322 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 ZDHHC11Q9H8X9 412 aa5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 METTL1Q9UBP6 276 aaKnown RBP5.87□□□□□ -1.47
SYNPO2-206ENST00000610556 C11orf94C9JXX5 98 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 TRGC1P0CF51 173 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 NDUFB7P17568 137 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 SMIM21Q3B7S5 101 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 C16orf82Q7Z2V1 217 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 C1orf210Q8IVY1 113 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 OR5D13Q8NGL4 314 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 Q8WTZ3 238 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 FAM103A1Q9BTL3 118 aaKnown RBP5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 PRDM14Q9GZV8 571 aa5.86□□□□□ -1.47
SYNPO2-206ENST00000610556 RNF122Q9H9V4 155 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms