RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 FOXB1Q99853 325 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 PAPPAQ13219 1627 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 TRGV5A0A0B4J1U4 118 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 C2CD4DB7Z1M9 353 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 KLF4O43474 513 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 TDHQ8IZJ6 230 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 OR4P4Q8NGL7 312 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 PPIHO43447 177 aaKnown RBP7.64□□□□□ -1.19
CSMD1-216ENST00000602557 GALNSP34059 522 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 RELBQ01201 579 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 RPEQ96AT9 228 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 SNAI3Q3KNW1 292 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 FAM208BQ5VWN6 2430 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 BRCA1P38398 1863 aaKnown RBP7.64□□□□□ -1.19
CSMD1-216ENST00000602557 NDUFB3O43676 98 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 ORM2P19652 201 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 PDPNQ86YL7 162 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 OR2W1Q9Y3N9 320 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 GLIPR1P48060 266 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 FUT5Q11128 374 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 TMEM56Q96MV1 263 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 KLK13Q9UKR3 277 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 CCL27Q9Y4X3 112 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 CDKN2AP42771 156 aaKnown RBP7.64□□□□□ -1.19
CSMD1-216ENST00000602557 OR10AC1Q8NH08 325 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 MRGPRDQ8TDS7 321 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 SPCS1Q9Y6A9 102 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 NGFP01138 241 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 GABRG2P18507 467 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 RPS4Y1P22090 263 aaKnown RBP7.64□□□□□ -1.19
CSMD1-216ENST00000602557 PRSS12P56730 875 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 FZD5Q13467 585 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 ZNF141Q15928 474 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 CITED2Q99967 270 aaPredicted RBP7.64□□□□□ -1.19
CSMD1-216ENST00000602557 NDUFAF3Q9BU61 184 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 SERGEFQ9UGK8 458 aa7.64□□□□□ -1.19
CSMD1-216ENST00000602557 J3KRW8 73 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 CTSDP07339 412 aaPredicted RBP7.63□□□□□ -1.19
CSMD1-216ENST00000602557 DLX1P56177 255 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 DEGS2Q6QHC5 323 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 RPS4Y2Q8TD47 263 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 SOSTQ9BQB4 213 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 YBX1P67809 324 aaKnown RBP7.63□□□□□ -1.19
CSMD1-216ENST00000602557 MGAT2Q10469 447 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 FXYD3Q14802 87 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 COL25A1Q9BXS0 654 aaPredicted RBP7.63□□□□□ -1.19
CSMD1-216ENST00000602557 SBF1O95248 1867 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 RALGAPA2Q2PPJ7 1873 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 SPTY2D1-AS1A0A0U1RR47 76 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 HPRT1P00492 218 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 AMY1AP04745 511 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 FOLR2P14207 255 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 KIR2DS2P43631 304 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 MRPL16Q9NX20 251 aaKnown RBP7.63□□□□□ -1.19
CSMD1-216ENST00000602557 LYZL6O75951 148 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 COX7A1P24310 79 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 TMEM196Q5HYL7 178 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 CCL17Q92583 94 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 NYNRINQ9P2P1 1898 aaKnown RBP7.63□□□□□ -1.19
CSMD1-216ENST00000602557 TMEM238LA0A1B0GVL6 79 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 A6NJY4 79 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 FCARP24071 287 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 Q6ZS52 159 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 EPPINO95925 133 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 ORM1P02763 201 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 JMJD6Q6NYC1 403 aaPredicted RBP7.63□□□□□ -1.19
CSMD1-216ENST00000602557 PTPMT1Q8WUK0 201 aaPredicted RBP7.63□□□□□ -1.19
CSMD1-216ENST00000602557 SONP18583 2426 aaKnown RBP7.63□□□□□ -1.19
CSMD1-216ENST00000602557 NDUFB4O95168 129 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 TMEM50BP56557 158 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 ADIPOQQ15848 244 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 C16orf47Q6ZP98 133 aaPredicted RBP7.63□□□□□ -1.19
CSMD1-216ENST00000602557 HDHD3Q9BSH5 251 aaPredicted RBP7.63□□□□□ -1.19
CSMD1-216ENST00000602557 CLEC1BQ9P126 229 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 TAF1LQ8IZX4 1826 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 MGPP08493 103 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 BTF3P20290 206 aaKnown RBP7.63□□□□□ -1.19
CSMD1-216ENST00000602557 PPP1CAP62136 330 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 DOLPP1Q86YN1 238 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 SIGMAR1Q99720 223 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 MARCH11A6NNE9 402 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 A8MXK9 166 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 POU2F2P09086 479 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 UCP3P55916 312 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 GCSAMLQ5JQS6 135 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 LRRC29Q8WV35 223 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 PGLYRP4Q96LB8 373 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 TMEM208Q9BTX3 173 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 GBF1Q92538 1859 aa7.63□□□□□ -1.19
CSMD1-216ENST00000602557 TRAV8-7A0A075B6U6 113 aa7.62□□□□□ -1.19
CSMD1-216ENST00000602557 SOCS1O15524 211 aa7.62□□□□□ -1.19
CSMD1-216ENST00000602557 PMCHL1Q16048 86 aa7.62□□□□□ -1.19
CSMD1-216ENST00000602557 LAMTOR1Q6IAA8 161 aa7.62□□□□□ -1.19
CSMD1-216ENST00000602557 SLC36A1Q7Z2H8 476 aa7.62□□□□□ -1.19
CSMD1-216ENST00000602557 MYOZ3Q8TDC0 251 aa7.62□□□□□ -1.19
CSMD1-216ENST00000602557 LOC390937A0A1W2PQ73 354 aa7.62□□□□□ -1.19
CSMD1-216ENST00000602557 SERTM1A2A2V5 107 aa7.62□□□□□ -1.19
CSMD1-216ENST00000602557 FAM157AC9JC47 383 aa7.62□□□□□ -1.19
CSMD1-216ENST00000602557 MPZL1O95297 269 aa7.62□□□□□ -1.19
CSMD1-216ENST00000602557 MIEN1Q9BRT3 115 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms