RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 RBPMSQ93062 196 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 CALYQ9NYX4 217 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 RBM7Q9Y580 266 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 DSCAMO60469 2012 aa14.63□□□□□ -0.07
SHKBP1-224ENST00000600718 hADV38S2A0JD32 116 aa14.63□□□□□ -0.07
SHKBP1-224ENST00000600718 F2RL2O00254 374 aa14.63□□□□□ -0.07
SHKBP1-224ENST00000600718 TSPAN9O75954 239 aa14.63□□□□□ -0.07
SHKBP1-224ENST00000600718 SIX6O95475 246 aa14.63□□□□□ -0.07
SHKBP1-224ENST00000600718 C4BPBP20851 252 aa14.63□□□□□ -0.07
SHKBP1-224ENST00000600718 SRSF1Q07955 248 aaKnown RBP eCLIP14.63□□□□□ -0.07
SHKBP1-224ENST00000600718 BVESQ8NE79 360 aa14.63□□□□□ -0.07
SHKBP1-224ENST00000600718 OR5M8Q8NGP6 311 aa14.63□□□□□ -0.07
SHKBP1-224ENST00000600718 AKR1E2Q96JD6 320 aa14.63□□□□□ -0.07
SHKBP1-224ENST00000600718 SUCNR1Q9BXA5 334 aa14.63□□□□□ -0.07
SHKBP1-224ENST00000600718 RAI1Q7Z5J4 1906 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 KBTBD11-OT1A0A1B0GTJ5 212 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 C17orf58Q2M2W7 97 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 LY6G6FQ5SQ64 297 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 RAB1CQ92928 201 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 RAB18Q9NP72 206 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 LPAR3Q9UBY5 353 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 CLN8Q9UBY8 286 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 JPT1Q9UK76 154 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 UBE2J1Q9Y385 318 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 MEX3AA1L020 520 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 ZNF729A6NN14 1252 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 DVL1O14640 695 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 OR8U9P0C7N5 309 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 ZP3P21754 424 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 SRSF4Q08170 494 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 GNMTQ14749 295 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 DCAF12L2Q5VW00 463 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 OR2T35Q8NGX2 323 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 OR8U1Q8NH10 309 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 TIMD4Q96H15 378 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 LINC00574Q9H8X3 128 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 TAS2R3Q9NYW6 316 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 CTSZQ9UBR2 303 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 LINC00312Q9Y6C7 94 aa14.62□□□□□ -0.07
SHKBP1-224ENST00000600718 C3orf85A0A1B0GTC6 90 aa14.61□□□□□ -0.07
SHKBP1-224ENST00000600718 F12P00748 615 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-224ENST00000600718 OR5AC1P0C628 307 aa14.61□□□□□ -0.07
SHKBP1-224ENST00000600718 SSTR2P30874 369 aa14.61□□□□□ -0.07
SHKBP1-224ENST00000600718 PPP1CCP36873 323 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-224ENST00000600718 TMEM187Q14656 261 aa14.61□□□□□ -0.07
SHKBP1-224ENST00000600718 TBC1D26Q86UD7 250 aa14.61□□□□□ -0.07
SHKBP1-224ENST00000600718 FGFRL1Q8N441 504 aa14.61□□□□□ -0.07
SHKBP1-224ENST00000600718 FAM216AQ8WUB2 273 aa14.61□□□□□ -0.07
SHKBP1-224ENST00000600718 PARP12Q9H0J9 701 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-224ENST00000600718 MED9Q9NWA0 146 aa14.61□□□□□ -0.07
SHKBP1-224ENST00000600718 YPEL1O60688 119 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 PGLYRP1O75594 196 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 CDKN1AP38936 164 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 TMEM33P57088 247 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 RPL31P62899 125 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 TMEM30BQ3MIR4 351 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 TCF23Q7RTU1 214 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 ZBTB34Q8NCN2 500 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 YPEL2Q96QA6 119 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 CHODLQ9H9P2 273 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 PRR13Q9NZ81 148 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 GNG12Q9UBI6 72 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 PKDREJQ9NTG1 2253 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 IGHV3-43A0A0B4J1X8 118 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 G3V3Q6 166 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 FCN3O75636 299 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 LY6HO94772 140 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 RGS11O94810 467 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 CFDP00746 253 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 IGHV3-43DP0DP04 118 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 ATF4P18848 351 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 LOXL3P58215 753 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 MSMO1Q15800 293 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 SP6Q3SY56 376 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 MORN2Q502X0 79 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 GSG1LQ6UXU4 331 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 LIAT1Q6ZQX7 453 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 GLYATL2Q8WU03 294 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 EDARADDQ8WWZ3 215 aa14.6□□□□□ -0.07
SHKBP1-224ENST00000600718 SMG1Q96Q15 3661 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 SPTBN1Q01082 2364 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 CCSO14618 274 aa14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 PHF1O43189 567 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 B3GALNT1O75752 331 aa14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 IGLV2-14P01704 120 aa14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 EFNA4P52798 201 aa14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 SRPXP78539 464 aa14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 LTC4SQ16873 150 aa14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 TMEM155Q4W5P6 130 aa14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 FAM53AQ6NSI3 398 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 ZNF645Q8N7E2 425 aa14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 LRTM2Q8N967 370 aa14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 PDCD10Q9BUL8 212 aa14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 METTL8Q9H825 291 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 PLEKHF2Q9H8W4 249 aa14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 C19orf12Q9NSK7 152 aa14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 IDI2-AS1Q9NZ38 188 aa14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 MIOXQ9UGB7 285 aa14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 RALYQ9UKM9 306 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-224ENST00000600718 KCNS2Q9ULS6 477 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms