RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 SRSF7Q16629 238 aaKnown RBP eCLIP15.6■□□□□ 0.09
SHKBP1-221ENST00000599833 OR8H3Q8N146 312 aa15.6■□□□□ 0.09
SHKBP1-221ENST00000599833 DRAM1Q8N682 238 aa15.6■□□□□ 0.09
SHKBP1-221ENST00000599833 RTN4IP1Q8WWV3 396 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-221ENST00000599833 MAFIPQ8WZ33 124 aa15.6■□□□□ 0.09
SHKBP1-221ENST00000599833 RPEQ96AT9 228 aa15.6■□□□□ 0.09
SHKBP1-221ENST00000599833 RBMXL1Q96E39 390 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-221ENST00000599833 AGMATQ9BSE5 352 aa15.6■□□□□ 0.09
SHKBP1-221ENST00000599833 CABLES2Q9BTV7 478 aa15.6■□□□□ 0.09
SHKBP1-221ENST00000599833 ABHD14AQ9BUJ0 271 aa15.6■□□□□ 0.09
SHKBP1-221ENST00000599833 ABCB10Q9NRK6 738 aa15.6■□□□□ 0.09
SHKBP1-221ENST00000599833 MGAT4AQ9UM21 535 aa15.6■□□□□ 0.09
SHKBP1-221ENST00000599833 IGHV1-3A0A0C4DH29 117 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 TMEM235A6NFC5 223 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 ITGB1BP1O14713 200 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 GSTP1P09211 210 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 CD3GP09693 182 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 REG1BP48304 166 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 RAB7AP51149 207 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 EBI3Q14213 229 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 CCDC144NLQ6NUI1 221 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 C12orf54Q6X4T0 127 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 Q6ZS46 218 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 GPR141Q7Z602 305 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 THNSL2Q86YJ6 484 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 Q8N2B8 174 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 OR56B4Q8NH76 319 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 ZNF251Q9BRH9 671 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 ZNF702PQ9H963 129 aa15.59■□□□□ 0.09
SHKBP1-221ENST00000599833 A0A0A6YYH2 397 aa15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 CLPSL1A2RUU4 121 aa15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 A6NJ64 397 aa15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 PROP1O75360 226 aa15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 SCGNO76038 276 aa15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 CRYBA1P05813 215 aa15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 GSTT2P0CG29 244 aa15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 GSTT2BP0CG30 244 aa15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 DTYMKP23919 212 aa15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 Q8N6K4 173 aa15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 OR4F5Q8NH21 305 aa15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 NUDCD2Q8WVJ2 157 aa15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 IL1F10Q8WWZ1 152 aa15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 KCTD12Q96CX2 325 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 ZNF747Q9BV97 191 aa15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 RANBP3Q9H6Z4 567 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-221ENST00000599833 ZNF736B4DX44 427 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 FABP7O15540 132 aa15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 LANCL1O43813 399 aa15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 GAPDHP04406 335 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 SNRNP70P08621 437 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 BRS3P32247 399 aa15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 KIR2DS4P43632 304 aa15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 SPCS2Q15005 226 aa15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 ARL6IP1Q15041 203 aa15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 IGSF11Q5DX21 431 aa15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 ZNF833PQ6ZTB9 187 aa15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 OR4A4PQ8NGN8 299 aa15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 WFDC12Q8WWY7 111 aa15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 RBM14Q96PK6 669 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 DCSTAMPQ9H295 470 aa15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 RAB18Q9NP72 206 aa15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 SLC23A1Q9UHI7 598 aa15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 PITPNC1Q9UKF7 332 aa15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 SIGLEC9Q9Y336 463 aa15.57■□□□□ 0.08
SHKBP1-221ENST00000599833 TRBV6-7A0A0A0MS04 114 aa15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 ST8SIA5O15466 376 aa15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 OR2F2O95006 317 aa15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 EIF4EP06730 217 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 PTHLHP12272 177 aa15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 MNDAP41218 407 aa15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 RPL5P46777 297 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 OR3A3P47888 321 aa15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 BLCAPP62952 87 aa15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 ARFRP1Q13795 201 aa15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 PNLIPRP3Q17RR3 467 aa15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 UBE2NLQ5JXB2 153 aa15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 IZUMO1Q8IYV9 350 aa15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 LYG1Q8N1E2 194 aa15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 C11orf54Q9H0W9 315 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 AUNIPQ9H7T9 357 aa15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 BEX1Q9HBH7 125 aa15.56■□□□□ 0.08
SHKBP1-221ENST00000599833 TRAV18A0A075B6X5 111 aa15.55■□□□□ 0.08
SHKBP1-221ENST00000599833 SAA2-SAA4A0A096LPE2 208 aa15.55■□□□□ 0.08
SHKBP1-221ENST00000599833 A0A1B0GUS0 222 aa15.55■□□□□ 0.08
SHKBP1-221ENST00000599833 XRCC3O43542 346 aa15.55■□□□□ 0.08
SHKBP1-221ENST00000599833 DIRAS3O95661 229 aa15.55■□□□□ 0.08
SHKBP1-221ENST00000599833 SAA2P0DJI9 122 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-221ENST00000599833 SRSF4Q08170 494 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-221ENST00000599833 C16orf82Q7Z2V1 217 aa15.55■□□□□ 0.08
SHKBP1-221ENST00000599833 WIPF2Q8TF74 440 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-221ENST00000599833 SERTAD4Q9NUC0 356 aa15.55■□□□□ 0.08
SHKBP1-221ENST00000599833 IGHV3-72A0A0B4J1Y9 119 aa15.54■□□□□ 0.08
SHKBP1-221ENST00000599833 RGS11O94810 467 aa15.54■□□□□ 0.08
SHKBP1-221ENST00000599833 ZBTB25P24278 435 aa15.54■□□□□ 0.08
SHKBP1-221ENST00000599833 IL3RAP26951 378 aa15.54■□□□□ 0.08
SHKBP1-221ENST00000599833 CEACAM6P40199 344 aa15.54■□□□□ 0.08
SHKBP1-221ENST00000599833 CLVS1Q8IUQ0 354 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-221ENST00000599833 SAMD12Q8N8I0 201 aa15.54■□□□□ 0.08
SHKBP1-221ENST00000599833 OR2AK2Q8NG84 335 aa15.54■□□□□ 0.08
SHKBP1-221ENST00000599833 CAPSLQ8WWF8 208 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms