RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 ZNF833PQ6ZTB9 187 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 C8orf59Q8N0T1 100 aaPredicted RBP10.63□□□□□ -0.71
TRIM28-211ENST00000597968 PRR18Q8N4B5 295 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 NPBQ8NG41 125 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 OR11H1Q8NG94 326 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 OR10V1Q8NGI7 309 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 OR1L1Q8NH94 360 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 PHYHIPQ92561 330 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 TFAP2CQ92754 450 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 ZNF251Q9BRH9 671 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 OR51J1Q9H342 316 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 RIMS4Q9H426 269 aaPredicted RBP10.63□□□□□ -0.71
TRIM28-211ENST00000597968 PSORS1C1Q9UIG5 152 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 VSIG4Q9Y279 399 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 RYR3Q15413 4870 aa10.63□□□□□ -0.71
TRIM28-211ENST00000597968 TENM3Q9P273 2699 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 I3L521 148 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 CASQ2O14958 399 aaPredicted RBP10.62□□□□□ -0.71
TRIM28-211ENST00000597968 ARPC1BO15143 372 aaKnown RBP10.62□□□□□ -0.71
TRIM28-211ENST00000597968 NBR2O15453 112 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 NDUFA3O95167 84 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 CHATP28329 748 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 CRIP2P52943 208 aaPredicted RBP10.62□□□□□ -0.71
TRIM28-211ENST00000597968 ACTBP60709 375 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 INSL4Q14641 139 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 GLT8D1Q68CQ7 371 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 SIGIRRQ6IA17 410 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 ZNF429Q86V71 674 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 ODF3L1Q8IXM7 274 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 ZNF491Q8N8L2 437 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 OR2AK2Q8NG84 335 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 MRPL30Q8TCC3 161 aaKnown RBP10.62□□□□□ -0.71
TRIM28-211ENST00000597968 FBLIM1Q8WUP2 373 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 RBMXL1Q96E39 390 aaKnown RBP10.62□□□□□ -0.71
TRIM28-211ENST00000597968 NEDD4LQ96PU5 975 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 RNF5Q99942 180 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 NABP2Q9BQ15 211 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 BANF2Q9H503 90 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 ABRACLQ9P1F3 81 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 KIAA1456Q9P272 454 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 NKX1-2Q9UD57 310 aaPredicted RBP10.62□□□□□ -0.71
TRIM28-211ENST00000597968 STEAP1Q9UHE8 339 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 SCOCQ9UIL1 159 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 MGAT4AQ9UM21 535 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 ZNF256Q9Y2P7 627 aaPredicted RBP10.62□□□□□ -0.71
TRIM28-211ENST00000597968 U3KQK5 164 aa10.62□□□□□ -0.71
TRIM28-211ENST00000597968 ERICH4A6NGS2 130 aa10.61□□□□□ -0.71
TRIM28-211ENST00000597968 RBBP9O75884 186 aa10.61□□□□□ -0.71
TRIM28-211ENST00000597968 BPNT1O95861 308 aa10.61□□□□□ -0.71
TRIM28-211ENST00000597968 MC5RP33032 325 aa10.61□□□□□ -0.71
TRIM28-211ENST00000597968 LUMP51884 338 aaPredicted RBP10.61□□□□□ -0.71
TRIM28-211ENST00000597968 ZNF616Q08AN1 781 aa10.61□□□□□ -0.71
TRIM28-211ENST00000597968 HMGN3Q15651 99 aa10.61□□□□□ -0.71
TRIM28-211ENST00000597968 C5orf64Q2M2E5 130 aa10.61□□□□□ -0.71
TRIM28-211ENST00000597968 DEFB136Q30KP8 78 aa10.61□□□□□ -0.71
TRIM28-211ENST00000597968 ZNF660Q6AZW8 331 aaPredicted RBP10.61□□□□□ -0.71
TRIM28-211ENST00000597968 PYHIN1Q6K0P9 492 aa10.61□□□□□ -0.71
TRIM28-211ENST00000597968 LIN54Q6MZP7 749 aa10.61□□□□□ -0.71
TRIM28-211ENST00000597968 MOB1BQ7L9L4 216 aa10.61□□□□□ -0.71
TRIM28-211ENST00000597968 NANOGP1Q8N7R0 232 aa10.61□□□□□ -0.71
TRIM28-211ENST00000597968 MINDY2Q8NBR6 621 aa10.61□□□□□ -0.71
TRIM28-211ENST00000597968 KCNG3Q8TAE7 436 aa10.61□□□□□ -0.71
TRIM28-211ENST00000597968 DUX3Q96PT4 197 aa10.61□□□□□ -0.71
TRIM28-211ENST00000597968 IGHV7-81A0A0B4J1V7 117 aa10.6□□□□□ -0.71
TRIM28-211ENST00000597968 TRAV41A0A0B4J266 112 aa10.6□□□□□ -0.71
TRIM28-211ENST00000597968 UBE2QL1A1L167 161 aa10.6□□□□□ -0.71
TRIM28-211ENST00000597968 OR5H14A6NHG9 310 aa10.6□□□□□ -0.71
TRIM28-211ENST00000597968 PTGES3LE9PB15 166 aa10.6□□□□□ -0.71
TRIM28-211ENST00000597968 RAB29O14966 203 aa10.6□□□□□ -0.71
TRIM28-211ENST00000597968 CD37P11049 281 aa10.6□□□□□ -0.71
TRIM28-211ENST00000597968 RAB9AP51151 201 aa10.6□□□□□ -0.71
TRIM28-211ENST00000597968 RPS27AP62979 156 aaKnown RBP10.6□□□□□ -0.71
TRIM28-211ENST00000597968 TMEM267Q0VDI3 215 aaPredicted RBP10.6□□□□□ -0.71
TRIM28-211ENST00000597968 KIAA0141Q14154 515 aaPredicted RBP10.6□□□□□ -0.71
TRIM28-211ENST00000597968 ZNF260Q3ZCT1 412 aa10.6□□□□□ -0.71
TRIM28-211ENST00000597968 C1orf100Q5SVJ3 147 aa10.6□□□□□ -0.71
TRIM28-211ENST00000597968 C5orf24Q7Z6I8 188 aa10.6□□□□□ -0.71
TRIM28-211ENST00000597968 OR1N2Q8NGR9 330 aa10.6□□□□□ -0.71
TRIM28-211ENST00000597968 TM2D1Q9BX74 207 aa10.6□□□□□ -0.71
TRIM28-211ENST00000597968 FKBP14Q9NWM8 211 aa10.6□□□□□ -0.71
TRIM28-211ENST00000597968 RNF150Q9ULK6 438 aa10.6□□□□□ -0.71
TRIM28-211ENST00000597968 TRBV6-6A0A0A6YYG2 114 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 C3orf84H3BNL1 204 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 ATP6V0E1O15342 81 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 NAPSAO96009 420 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 SLC2A2P11168 524 aaPredicted RBP10.59□□□□□ -0.71
TRIM28-211ENST00000597968 MYF6P23409 242 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 PPP1CCP36873 323 aaKnown RBP10.59□□□□□ -0.71
TRIM28-211ENST00000597968 ECI1P42126 302 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 FAM27D1Q5T7N8 215 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 ZNF880Q6PDB4 577 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 CD200R1LQ6Q8B3 271 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 OR52L2PQ8NGH6 319 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 NRG4Q8WWG1 115 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 EDARADDQ8WWZ3 215 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 MND1Q9BWT6 205 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 TMEM59Q9BXS4 323 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 MRPL20Q9BYC9 149 aaKnown RBP10.59□□□□□ -0.71
TRIM28-211ENST00000597968 ANKRD60Q9BZ19 345 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 SMAD5-AS1Q9Y6J3 95 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms