RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 PDCD6O75340 191 aa12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 CD34P28906 385 aa12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 MYCNOSP40205 109 aa12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 KCNJ3P48549 501 aa12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 DCTN2Q13561 401 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 HEPN1Q6WQI6 88 aa12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 TRAPPC6BQ86SZ2 158 aa12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 OR5H6Q8NGV6 325 aa12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 ZNF596Q8TC21 504 aa12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 CORO2AQ92828 525 aa12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 ASCL2Q99929 193 aa12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 BARHL1Q9BZE3 327 aa12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 RBM38Q9H0Z9 239 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 PLEKHJ1Q9NW61 149 aa12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 COMMD3Q9UBI1 195 aa12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 LINC00527Q9UJ94 153 aa12.98□□□□□ -0.33
SHKBP1-215ENST00000597649 FAM90A9PA6NNJ1 464 aa12.97□□□□□ -0.33
SHKBP1-215ENST00000597649 C3orf84H3BNL1 204 aa12.97□□□□□ -0.33
SHKBP1-215ENST00000597649 SCGNO76038 276 aa12.97□□□□□ -0.33
SHKBP1-215ENST00000597649 GLAP06280 429 aa12.97□□□□□ -0.33
SHKBP1-215ENST00000597649 GLIPR1P48060 266 aa12.97□□□□□ -0.33
SHKBP1-215ENST00000597649 PLA2G7Q13093 441 aa12.97□□□□□ -0.33
SHKBP1-215ENST00000597649 ATXN7L3Q14CW9 347 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-215ENST00000597649 HLA-DRB5Q30154 266 aa12.97□□□□□ -0.33
SHKBP1-215ENST00000597649 KRBOX4Q5JUW0 171 aa12.97□□□□□ -0.33
SHKBP1-215ENST00000597649 FAM89BQ8N5H3 189 aa12.97□□□□□ -0.33
SHKBP1-215ENST00000597649 RHBDL2Q9NX52 303 aa12.97□□□□□ -0.33
SHKBP1-215ENST00000597649 ZNF581Q9P0T4 197 aa12.97□□□□□ -0.33
SHKBP1-215ENST00000597649 UBE2QL1A1L167 161 aa12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 M0QZK8 103 aa12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 SOCS1O15524 211 aa12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 CSN2P05814 226 aa12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 AESQ08117 197 aa12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 OR52W1Q6IF63 320 aa12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 SAMD12Q8N8I0 201 aa12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 OR10R2Q8NGX6 335 aa12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 DYNC2LI1Q8TCX1 351 aa12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 RAX2Q96IS3 184 aa12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 PRR25Q96S07 402 aa12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 DIABLOQ9NR28 239 aa12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 ZFP57Q9NU63 452 aa12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 ETAA1Q9NY74 926 aa12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 CCDC59Q9P031 241 aaKnown RBP12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 RCC2Q9P258 522 aaKnown RBP12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 MOB4Q9Y3A3 225 aa12.96□□□□□ -0.33
SHKBP1-215ENST00000597649 TRGV10A0A0A0MS01 117 aa12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 A0A0A6YYD4 124 aa12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 LINC01548A6NM66 108 aa12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 NUDT19A8MXV4 375 aa12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 CHATP28329 748 aa12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 LUMP51884 338 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 UBE2NLQ5JXB2 153 aa12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 SIGIRRQ6IA17 410 aa12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 C6orf201Q7Z4U5 140 aa12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 KLHL30-AS1Q8NEE0 82 aa12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 RAB3CQ96E17 227 aa12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 S100A16Q96FQ6 103 aaKnown RBP12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 DCUN1D5Q9BTE7 237 aa12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 GAL3ST2Q9H3Q3 398 aa12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 BATF3Q9NR55 127 aa12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 TAS2R3Q9NYW6 316 aa12.95□□□□□ -0.34
SHKBP1-215ENST00000597649 A0A075B6Q4 140 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 MEIKINA0A087WXM9 373 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 TMEM30CPA0ZSE6 113 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 RAMP3O60896 148 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 FAM106CPP0CH98 169 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 CEACAM3P40198 252 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 ARHGDIBP52566 201 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 MRPS15P82914 257 aaKnown RBP12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 ARL6IP1Q15041 203 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 C17orf58Q2M2W7 97 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 THNSL2Q86YJ6 484 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 C5orf56Q8N8D9 126 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 PLPPR1Q8TBJ4 325 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 CHPT1Q8WUD6 406 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 ARHGAP5-AS1Q96IT6 56 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 CMTM3Q96MX0 182 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 FAAP24Q9BTP7 215 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 CHMP1AQ9HD42 196 aaPredicted RBP12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 ZMAT5Q9UDW3 170 aaKnown RBP12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 HSF4Q9ULV5 492 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 HYDINQ4G0P3 5121 aa12.94□□□□□ -0.34
SHKBP1-215ENST00000597649 A0A087X0M5 115 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 A0A1B0GX30 115 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 ODAMA1E959 279 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 OOSP1A8MZH6 123 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 FAM25AB3EWG3 89 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 FAM25CB3EWG5 89 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 FAM25GB3EWG6 89 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 CCL24O00175 119 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 RAB27BO00194 218 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 TOR1AO14656 332 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 RGS5O15539 181 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 CA11O75493 328 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 SLC6A1P30531 599 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 MNDAP41218 407 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 PRRX1P54821 245 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 TMEM50BP56557 158 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 DIAPH2-AS1Q14236 149 aa12.93□□□□□ -0.34
SHKBP1-215ENST00000597649 MOGAT2Q3SYC2 334 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms