RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 A0A1B0GX12 115 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 EFCAB9A8MZ26 197 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 J3QQQ9 107 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 LDOC1O95751 146 aaPredicted RBP1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 CST4P01036 141 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 LYNX1P0DP58 116 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 CCL2P13500 99 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 ATF1P18846 271 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 GADD45AP24522 165 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 RCVRNP35243 200 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 RPL26P61254 145 aaKnown RBP1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 RAB31Q13636 194 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 XKRXQ6PP77 449 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 C2orf91Q6ZV80 131 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 LRRC6Q86X45 466 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 ST13P4Q8IZP2 240 aaPredicted RBP1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 SLC35F6Q8N357 371 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 TMEM239Q8WW34 195 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 FGF13Q92913 245 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 MED18Q9BUE0 208 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 CDCA4Q9BXL8 241 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 C11orf1Q9H5F2 150 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 METTL8Q9H825 291 aaKnown RBP1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 NDUFB11Q9NX14 153 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 PRO2289Q9P1D8 64 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 RPL26L1Q9UNX3 145 aaKnown RBP1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 POFUT2Q9Y2G5 429 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 FIS1Q9Y3D6 152 aa1.1□□□□□ -2.23
SMCHD1-207ENST00000581711 AHNAK2Q8IVF2 5795 aa1.09□□□□□ -2.23
SMCHD1-207ENST00000581711 MDFIC2A0A1B0GVS7 189 aa1.09□□□□□ -2.23
SMCHD1-207ENST00000581711 DHRS12A0PJE2 317 aa1.09□□□□□ -2.23
SMCHD1-207ENST00000581711 H3BSA7 217 aa1.09□□□□□ -2.23
SMCHD1-207ENST00000581711 CRXO43186 299 aaPredicted RBP1.09□□□□□ -2.23
SMCHD1-207ENST00000581711 SNAP29O95721 258 aa1.09□□□□□ -2.23
SMCHD1-207ENST00000581711 PSMB3P49720 205 aa1.09□□□□□ -2.23
SMCHD1-207ENST00000581711 EMP2P54851 167 aa1.09□□□□□ -2.23
SMCHD1-207ENST00000581711 GLT6D1Q7Z4J2 308 aa1.09□□□□□ -2.23
SMCHD1-207ENST00000581711 MRPL52Q86TS9 123 aaKnown RBP1.09□□□□□ -2.23
SMCHD1-207ENST00000581711 ZNF471Q9BX82 626 aaPredicted RBP1.09□□□□□ -2.23
SMCHD1-207ENST00000581711 SPZ1Q9BXG8 430 aa1.09□□□□□ -2.23
SMCHD1-207ENST00000581711 PSMD13Q9UNM6 376 aa1.09□□□□□ -2.23
SMCHD1-207ENST00000581711 CHD2O14647 1828 aaKnown RBP1.08□□□□□ -2.24
SMCHD1-207ENST00000581711 H3BPC8 53 aa1.08□□□□□ -2.24
SMCHD1-207ENST00000581711 SGCEO43556 437 aa1.08□□□□□ -2.24
SMCHD1-207ENST00000581711 PSMD7P51665 324 aa1.08□□□□□ -2.24
SMCHD1-207ENST00000581711 FLOT2Q14254 428 aa1.08□□□□□ -2.24
SMCHD1-207ENST00000581711 ZBTB6Q15916 424 aa1.08□□□□□ -2.24
SMCHD1-207ENST00000581711 ZNF283Q8N7M2 679 aa1.08□□□□□ -2.24
SMCHD1-207ENST00000581711 MRPS24Q96EL2 167 aaKnown RBP1.08□□□□□ -2.24
SMCHD1-207ENST00000581711 CHST5Q9GZS9 411 aa1.08□□□□□ -2.24
SMCHD1-207ENST00000581711 DNAJC12Q9UKB3 198 aa1.08□□□□□ -2.24
SMCHD1-207ENST00000581711 SNX12Q9UMY4 172 aa1.08□□□□□ -2.24
SMCHD1-207ENST00000581711 ALG5Q9Y673 324 aa1.08□□□□□ -2.24
SMCHD1-207ENST00000581711 FLG2Q5D862 2391 aaPredicted RBP1.08□□□□□ -2.24
SMCHD1-207ENST00000581711 TRGV2A0A075B6R0 118 aa1.07□□□□□ -2.24
SMCHD1-207ENST00000581711 LINC00862A6NCI5 91 aa1.07□□□□□ -2.24
SMCHD1-207ENST00000581711 GNRH2O43555 120 aa1.07□□□□□ -2.24
SMCHD1-207ENST00000581711 NAPSAO96009 420 aa1.07□□□□□ -2.24
SMCHD1-207ENST00000581711 ASS1P00966 412 aaKnown RBP1.07□□□□□ -2.24
SMCHD1-207ENST00000581711 CCDC172P0C7W6 258 aa1.07□□□□□ -2.24
SMCHD1-207ENST00000581711 CRHBPP24387 322 aa1.07□□□□□ -2.24
SMCHD1-207ENST00000581711 SERPINB10P48595 397 aa1.07□□□□□ -2.24
SMCHD1-207ENST00000581711 UAP1Q16222 522 aaPredicted RBP1.07□□□□□ -2.24
SMCHD1-207ENST00000581711 MTERF4Q7Z6M4 381 aaKnown RBP1.07□□□□□ -2.24
SMCHD1-207ENST00000581711 OR4P4Q8NGL7 312 aa1.07□□□□□ -2.24
SMCHD1-207ENST00000581711 CCDC127Q96BQ5 260 aa1.07□□□□□ -2.24
SMCHD1-207ENST00000581711 TRNT1Q96Q11 434 aaKnown RBP1.07□□□□□ -2.24
SMCHD1-207ENST00000581711 TMEM216Q9P0N5 145 aa1.07□□□□□ -2.24
SMCHD1-207ENST00000581711 SCN9AQ15858 1988 aa1.07□□□□□ -2.24
SMCHD1-207ENST00000581711 KDM5BQ9UGL1 1544 aa1.06□□□□□ -2.24
SMCHD1-207ENST00000581711 IGHV3-15A0A0B4J1V0 119 aa1.06□□□□□ -2.24
SMCHD1-207ENST00000581711 A8MUN3 132 aa1.06□□□□□ -2.24
SMCHD1-207ENST00000581711 ZW10O43264 779 aa1.06□□□□□ -2.24
SMCHD1-207ENST00000581711 TNFAIP8O95379 198 aa1.06□□□□□ -2.24
SMCHD1-207ENST00000581711 ANGP03950 147 aaKnown RBP1.06□□□□□ -2.24
SMCHD1-207ENST00000581711 RPL14P50914 215 aaKnown RBP1.06□□□□□ -2.24
SMCHD1-207ENST00000581711 LINC00313P59037 77 aa1.06□□□□□ -2.24
SMCHD1-207ENST00000581711 STX3Q13277 289 aa1.06□□□□□ -2.24
SMCHD1-207ENST00000581711 COA5Q86WW8 74 aa1.06□□□□□ -2.24
SMCHD1-207ENST00000581711 TAMM41Q96BW9 452 aa1.06□□□□□ -2.24
SMCHD1-207ENST00000581711 FAM210AQ96ND0 272 aa1.06□□□□□ -2.24
SMCHD1-207ENST00000581711 MND1Q9BWT6 205 aa1.06□□□□□ -2.24
SMCHD1-207ENST00000581711 LINC00527Q9UJ94 153 aa1.06□□□□□ -2.24
SMCHD1-207ENST00000581711 TENM3Q9P273 2699 aa1.06□□□□□ -2.24
SMCHD1-207ENST00000581711 DSCAMO60469 2012 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 PKD1L2Q7Z442 2459 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 RFPL4AA6NLU0 287 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 RFPL4AL1F8VTS6 287 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 SULT1C2O00338 296 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 UBFD1O14562 309 aaKnown RBP1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 LIMS3P0CW19 117 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 LIMS4P0CW20 117 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 CCL3P10147 92 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 CDK2P24941 298 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 CRYBB3P26998 211 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 RAP1GDS1P52306 607 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 FGF12P61328 243 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 GTF2BQ00403 316 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 PSG3Q16557 428 aa1.05□□□□□ -2.24
SMCHD1-207ENST00000581711 OR5K1Q8NHB7 308 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms