RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 DTX3Q8N9I9 347 aa12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 SETD6Q8TBK2 473 aa12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 TOMM40LQ969M1 308 aa12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 YPEL2Q96QA6 119 aa12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 HDHD3Q9BSH5 251 aaPredicted RBP12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 MRPS26Q9BYN8 205 aaKnown RBP12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 Q9N2K0 584 aa12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 C12orf4Q9NQ89 552 aa12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 NECAP2Q9NVZ3 263 aa12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 FAM90A9PA6NNJ1 464 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 SERPINE3A8MV23 424 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 MFNGO00587 321 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 SCGNO76038 276 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 RGS11O94810 467 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 GAPDHP04406 335 aaKnown RBP12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 CD3GP09693 182 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 HIST1H1DP16402 221 aaKnown RBP12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 GNB3P16520 340 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 IL3RAP26951 378 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 TGFBR1P36897 503 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 RPS19P39019 145 aaKnown RBP12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 KIR2DS4P43632 304 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 LSM3P62310 102 aaKnown RBP12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 ZNF816Q0VGE8 651 aaPredicted RBP12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 CT45A1Q5HYN5 189 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 THNSL2Q86YJ6 484 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 OR8H3Q8N146 312 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 OR52L2PQ8NGH6 319 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 OR10V1Q8NGI7 309 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 CT45A3Q8NHU0 189 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 ST6GALNAC6Q969X2 333 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 RANBP3Q9H6Z4 567 aaPredicted RBP12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 SIGLEC9Q9Y336 463 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 ETV7Q9Y603 341 aa12.57□□□□□ -0.4
CHMP1A-206ENST00000549139 SLC31A2O15432 143 aa12.56□□□□□ -0.4
CHMP1A-206ENST00000549139 CHST1O43916 411 aa12.56□□□□□ -0.4
CHMP1A-206ENST00000549139 ZNF137PP52743 207 aa12.56□□□□□ -0.4
CHMP1A-206ENST00000549139 MRPS15P82914 257 aaKnown RBP12.56□□□□□ -0.4
CHMP1A-206ENST00000549139 DIAPH2-AS1Q14236 149 aa12.56□□□□□ -0.4
CHMP1A-206ENST00000549139 C16orf82Q7Z2V1 217 aa12.56□□□□□ -0.4
CHMP1A-206ENST00000549139 LGALS14Q8TCE9 139 aa12.56□□□□□ -0.4
CHMP1A-206ENST00000549139 NPFFR1Q9GZQ6 430 aa12.56□□□□□ -0.4
CHMP1A-206ENST00000549139 SPATA2Q9UM82 520 aa12.56□□□□□ -0.4
CHMP1A-206ENST00000549139 A0A1W2PPI3 338 aa12.55□□□□□ -0.4
CHMP1A-206ENST00000549139 HSD17B6O14756 317 aa12.55□□□□□ -0.4
CHMP1A-206ENST00000549139 HLA-DRB3P79483 266 aa12.55□□□□□ -0.4
CHMP1A-206ENST00000549139 GNMTQ14749 295 aa12.55□□□□□ -0.4
CHMP1A-206ENST00000549139 CDNFQ49AH0 187 aa12.55□□□□□ -0.4
CHMP1A-206ENST00000549139 TMEM219Q86XT9 240 aa12.55□□□□□ -0.4
CHMP1A-206ENST00000549139 ANKRD13BQ86YJ7 626 aa12.55□□□□□ -0.4
CHMP1A-206ENST00000549139 C11orf44Q8N8P7 122 aa12.55□□□□□ -0.4
CHMP1A-206ENST00000549139 OR5H6Q8NGV6 325 aa12.55□□□□□ -0.4
CHMP1A-206ENST00000549139 IL1F10Q8WWZ1 152 aa12.55□□□□□ -0.4
CHMP1A-206ENST00000549139 RHBDL2Q9NX52 303 aa12.55□□□□□ -0.4
CHMP1A-206ENST00000549139 A0A075B6Q4 140 aa12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 IGHV1-3A0A0C4DH29 117 aa12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 TRDCB7Z8K6 153 aa12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 ITGB1BP1O14713 200 aa12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 TFAP2AP05549 437 aa12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 LPLP06858 475 aa12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 SCTP09683 121 aa12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 FAM106CPP0CH98 169 aa12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 CD24P25063 80 aa12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 PPP1CCP36873 323 aaKnown RBP12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 ALDH3B2P48448 385 aa12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 HABP2Q14520 560 aaPredicted RBP12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 SRSF7Q16629 238 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 C11orf87Q6NUJ2 197 aa12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 OR4C13Q8NGP0 309 aa12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 CAPSLQ8WWF8 208 aa12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 RTN4IP1Q8WWV3 396 aaPredicted RBP12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 PHF21AQ96BD5 680 aa12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 RBM14Q96PK6 669 aaKnown RBP12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 ABHD14AQ9BUJ0 271 aa12.54□□□□□ -0.4
CHMP1A-206ENST00000549139 A0A0A6YYH2 397 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 A6NJ64 397 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 TXNL1O43396 289 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 OR2F2O95006 317 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 FCGR3AP08637 254 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 GSTP1P09211 210 aaKnown RBP12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 ZBTB25P24278 435 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 SERPINB10P48595 397 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 VBP1P61758 197 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 NCS1P62166 190 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 ARFRP1Q13795 201 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 EBI3Q14213 229 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 ZNF260Q3ZCT1 412 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 C11orf88Q6PI97 169 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 LYG1Q8N1E2 194 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 Q8N2B8 174 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 DRAM1Q8N682 238 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 OR56B4Q8NH76 319 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 SLC25A46Q96AG3 418 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 SLC25A38Q96DW6 304 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 AKR1E2Q96JD6 320 aa12.53□□□□□ -0.4
CHMP1A-206ENST00000549139 LANCL1O43813 399 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 GABARAPO95166 117 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 SNRNP70P08621 437 aaKnown RBP12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 TALDO1P37837 337 aa12.52□□□□□ -0.41
CHMP1A-206ENST00000549139 CEACAM6P40199 344 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms