RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 GCH1P30793 250 aa15.56■□□□□ 0.08
PRPF40B-208ENST00000548436 P2RY6Q15077 328 aa15.56■□□□□ 0.08
PRPF40B-208ENST00000548436 SLC25A15Q9Y619 301 aa15.56■□□□□ 0.08
PRPF40B-208ENST00000548436 TXNL1O43396 289 aa15.56■□□□□ 0.08
PRPF40B-208ENST00000548436 HFEQ30201 348 aa15.56■□□□□ 0.08
PRPF40B-208ENST00000548436 OR52L2PQ8NGH6 319 aa15.56■□□□□ 0.08
PRPF40B-208ENST00000548436 GALMQ96C23 342 aa15.56■□□□□ 0.08
PRPF40B-208ENST00000548436 EIF5A2Q9GZV4 153 aaKnown RBP15.56■□□□□ 0.08
PRPF40B-208ENST00000548436 RNF150Q9ULK6 438 aa15.56■□□□□ 0.08
PRPF40B-208ENST00000548436 USF3Q68DE3 2245 aa15.56■□□□□ 0.08
PRPF40B-208ENST00000548436 RUNX1Q01196 453 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 PEA15Q15121 130 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 IGFL3Q6UXB1 125 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 PRR7Q8TB68 274 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 C5orf30Q96GV9 206 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 RAB40CQ96S21 281 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 OOEPA6NGQ2 149 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 HBZP02008 142 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 RPL23AP62750 156 aaKnown RBP15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 COL10A1Q03692 680 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 TMEM267Q0VDI3 215 aaPredicted RBP15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 MSMPQ1L6U9 139 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 FAM122CQ6P4D5 195 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 BEND4Q6ZU67 534 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 RPRMLQ8N4K4 120 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 ZNF645Q8N7E2 425 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 ATP5SQ99766 215 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 NDRG3Q9UGV2 375 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 KPTNQ9Y664 436 aa15.55■□□□□ 0.08
PRPF40B-208ENST00000548436 A0A1B0GWJ7 208 aa15.54■□□□□ 0.08
PRPF40B-208ENST00000548436 UMAD1C9J7I0 102 aa15.54■□□□□ 0.08
PRPF40B-208ENST00000548436 TM4SF5O14894 197 aa15.54■□□□□ 0.08
PRPF40B-208ENST00000548436 CTRB1P17538 263 aa15.54■□□□□ 0.08
PRPF40B-208ENST00000548436 IL2RGP31785 369 aa15.54■□□□□ 0.08
PRPF40B-208ENST00000548436 CD200P41217 278 aa15.54■□□□□ 0.08
PRPF40B-208ENST00000548436 GABRA2P47869 451 aa15.54■□□□□ 0.08
PRPF40B-208ENST00000548436 NHLH1Q02575 133 aa15.54■□□□□ 0.08
PRPF40B-208ENST00000548436 CTRB2Q6GPI1 263 aa15.54■□□□□ 0.08
PRPF40B-208ENST00000548436 TPRX1Q8N7U7 411 aa15.54■□□□□ 0.08
PRPF40B-208ENST00000548436 MRGPRDQ8TDS7 321 aa15.54■□□□□ 0.08
PRPF40B-208ENST00000548436 OR2D2Q9H210 308 aa15.54■□□□□ 0.08
PRPF40B-208ENST00000548436 GPR37O15354 613 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 SYNGR2O43760 224 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 IAPPP10997 89 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 GLIPR1P48060 266 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 SULT1A1P50225 295 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 CCL20P78556 96 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 ETV3LQ6ZN32 361 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 STX12Q86Y82 276 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 FBXO7Q9Y3I1 522 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 WSB1Q9Y6I7 421 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 CADP27708 2225 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 ALKBH2Q6NS38 261 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 SPSB3Q6PJ21 355 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 ZNF474Q6S9Z5 364 aaPredicted RBP15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 LRP11Q86VZ4 500 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 FAM169BQ8N8A8 192 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 GNPNAT1Q96EK6 184 aaPredicted RBP15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 FAM215AQ9Y5M1 114 aa15.53■□□□□ 0.08
PRPF40B-208ENST00000548436 MGAQ8IWI9 3026 aa15.52■□□□□ 0.08
PRPF40B-208ENST00000548436 AKAP13Q12802 2813 aa15.52■□□□□ 0.08
PRPF40B-208ENST00000548436 RAMP3O60896 148 aa15.52■□□□□ 0.08
PRPF40B-208ENST00000548436 ZNF83P51522 516 aa15.52■□□□□ 0.08
PRPF40B-208ENST00000548436 RPL30P62888 115 aaKnown RBP15.52■□□□□ 0.08
PRPF40B-208ENST00000548436 EIF4EBP1Q13541 118 aaPredicted RBP15.52■□□□□ 0.08
PRPF40B-208ENST00000548436 RTP5Q14D33 572 aa15.52■□□□□ 0.08
PRPF40B-208ENST00000548436 SMIM21Q3B7S5 101 aa15.52■□□□□ 0.08
PRPF40B-208ENST00000548436 KRBOX4Q5JUW0 171 aa15.52■□□□□ 0.08
PRPF40B-208ENST00000548436 Q6ZS92 163 aa15.52■□□□□ 0.08
PRPF40B-208ENST00000548436 FGFRL1Q8N441 504 aa15.52■□□□□ 0.08
PRPF40B-208ENST00000548436 CD177Q8N6Q3 437 aa15.52■□□□□ 0.08
PRPF40B-208ENST00000548436 OR2Z1Q8NG97 314 aa15.52■□□□□ 0.08
PRPF40B-208ENST00000548436 LRRC29Q8WV35 223 aa15.52■□□□□ 0.08
PRPF40B-208ENST00000548436 MEX3AA1L020 520 aaKnown RBP15.52■□□□□ 0.07
PRPF40B-208ENST00000548436 K7EM74 188 aa15.52■□□□□ 0.07
PRPF40B-208ENST00000548436 IFNL4K9M1U5 179 aa15.52■□□□□ 0.07
PRPF40B-208ENST00000548436 CEACAM1P13688 526 aa15.52■□□□□ 0.07
PRPF40B-208ENST00000548436 SSTR5P35346 364 aa15.52■□□□□ 0.07
PRPF40B-208ENST00000548436 ZNF808Q8N4W9 903 aaPredicted RBP15.52■□□□□ 0.07
PRPF40B-208ENST00000548436 LFNGQ8NES3 379 aa15.52■□□□□ 0.07
PRPF40B-208ENST00000548436 OR13A1Q8NGR1 328 aa15.52■□□□□ 0.07
PRPF40B-208ENST00000548436 OR10Z1Q8NGY1 313 aa15.52■□□□□ 0.07
PRPF40B-208ENST00000548436 RARRES2Q99969 163 aa15.52■□□□□ 0.07
PRPF40B-208ENST00000548436 TOLLIPQ9H0E2 274 aa15.52■□□□□ 0.07
PRPF40B-208ENST00000548436 RIF1Q5UIP0 2472 aaKnown RBP15.51■□□□□ 0.07
PRPF40B-208ENST00000548436 ZFHX2Q9C0A1 2572 aaPredicted RBP15.51■□□□□ 0.07
PRPF40B-208ENST00000548436 RNF212BA8MTL3 300 aa15.51■□□□□ 0.07
PRPF40B-208ENST00000548436 H7C2Y5 167 aa15.51■□□□□ 0.07
PRPF40B-208ENST00000548436 EGR1P18146 543 aa15.51■□□□□ 0.07
PRPF40B-208ENST00000548436 ARL16Q0P5N6 197 aa15.51■□□□□ 0.07
PRPF40B-208ENST00000548436 AKIRIN2Q53H80 203 aa15.51■□□□□ 0.07
PRPF40B-208ENST00000548436 ASCL5Q7RTU5 278 aa15.51■□□□□ 0.07
PRPF40B-208ENST00000548436 S100PBPQ96BU1 408 aa15.51■□□□□ 0.07
PRPF40B-208ENST00000548436 PBDC1Q9BVG4 233 aa15.51■□□□□ 0.07
PRPF40B-208ENST00000548436 PSENENQ9NZ42 101 aa15.51■□□□□ 0.07
PRPF40B-208ENST00000548436 DUSP13Q9UII6 198 aa15.51■□□□□ 0.07
PRPF40B-208ENST00000548436 A0A1B0GW64 132 aa15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 DFFBO76075 338 aa15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 TAS2R30P59541 319 aa15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 OR2B11Q5JQS5 317 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms