RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 IL17RELQ6ZVW7 336 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 Q71RC1 249 aaPredicted RBP8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 OR11H6Q8NGC7 330 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 OR10A7Q8NGE5 316 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 OR52M1Q8NGK5 317 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 ZNF596Q8TC21 504 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 PHF21AQ96BD5 680 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 HYLS1Q96M11 299 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 ST6GALNAC5Q9BVH7 336 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 TMEM133Q9H2Q1 129 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 GAL3ST2Q9H3Q3 398 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 SCPEP1Q9HB40 452 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 CHMP1AQ9HD42 196 aaPredicted RBP8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 YAE1D1Q9NRH1 226 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 TMEM160Q9NX00 188 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 OR1A1Q9P1Q5 309 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 MTFP1Q9UDX5 166 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 ANXA10Q9UJ72 324 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 KCNS2Q9ULS6 477 aa8.69□□□□□ -1.02
NPIPB3-210ENST00000542817 TRBV6-7A0A0A0MS04 114 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 IGHV3-7P01780 117 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 TALDO1P37837 337 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 HTR2BP41595 481 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 IL18Q14116 193 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 LTC4SQ16873 150 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 RNASE12Q5GAN4 147 aaKnown RBP8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 ZNF660Q6AZW8 331 aaPredicted RBP8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 MZT2BQ6NZ67 158 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 TRAT1Q6PIZ9 186 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 FAM131AQ6UXB0 335 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 PDZD9Q8IXQ8 264 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 PRR18Q8N4B5 295 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 OR4A4PQ8NGN8 299 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 DEDD2Q8WXF8 326 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 LHX4Q969G2 390 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 AIFM2Q9BRQ8 373 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 SUCNR1Q9BXA5 334 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 PSG11Q9UQ72 335 aa8.68□□□□□ -1.02
NPIPB3-210ENST00000542817 IGHV3OR16-10A0A075B7F0 116 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 IGHV2-26A0A0B4J1V2 119 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 A0A1W2PPH5 198 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 INAFM1C9JVW0 142 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 LY6LH3BQJ8 138 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 SPINT2O43291 252 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 COX7A1P24310 79 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 PPP1CCP36873 323 aaKnown RBP8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 UBE2E1P51965 193 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 BAK1Q16611 211 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 MORN2Q502X0 79 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 CT45A1Q5HYN5 189 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 LY6G6FQ5SQ64 297 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 RUSC1-AS1Q66K80 236 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 ZNF626Q68DY1 528 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 ODF3L1Q8IXM7 274 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 DYNAPQ8N1N2 210 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 BEST4Q8NFU0 473 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 OR10V1Q8NGI7 309 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 OR4P4Q8NGL7 312 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 CT45A3Q8NHU0 189 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 AGMATQ9BSE5 352 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 MARVELD1Q9BSK0 173 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 RANGRFQ9HD47 186 aaPredicted RBP8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 KCNIP1Q9NZI2 227 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 RABL2AQ9UBK7 228 aaPredicted RBP8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 JPT1Q9UK76 154 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 MGAT4AQ9UM21 535 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 RABL2BQ9UNT1 228 aa8.67□□□□□ -1.02
NPIPB3-210ENST00000542817 TRAV40A0A0B4J280 105 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 IGHV1-69DA0A0B4J2H0 117 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 A0A1W2PPE3 182 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 A0A1W2PRD5 423 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 A0A1W2PRF3 423 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 A0A1W2PRM7 423 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 LEUTXA8MZ59 168 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 SDCBPO00560 298 aaPredicted RBP8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 YPEL1O60688 119 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 PROP1O75360 226 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 TUSC2O75896 110 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 DIRAS3O95661 229 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 IGHV1-69P01742 117 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 CD74P04233 296 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 CTRB1P17538 263 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 NFYBP25208 207 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 KIR2DS4P43632 304 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 CBX5P45973 191 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 MRPS10P82664 201 aaKnown RBP8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 KIR2DS1Q14954 304 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 CTRB2Q6GPI1 263 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 PLET1Q6UQ28 207 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 BRD3OSQ6XYD6 125 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 C9orf139Q6ZV77 190 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 OVCH2Q7RTZ1 564 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 LHFPL4Q7Z7J7 247 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 H1FOOQ8IZA3 346 aaPredicted RBP8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 BCL6BQ8N143 479 aaPredicted RBP8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 ABHD12Q8N2K0 398 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 LINC00311Q8N616 119 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 C8orf31Q8N9H6 132 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 OR5AP2Q8NGF4 316 aa8.66□□□□□ -1.02
NPIPB3-210ENST00000542817 OR4D10Q8NGI6 311 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms