RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 OR51I2Q9H344 312 aa11.55□□□□□ -0.56
BNIP3-202ENST00000540159 TMPRSS5Q9H3S3 457 aa11.55□□□□□ -0.56
BNIP3-202ENST00000540159 S100A9P06702 114 aaKnown RBP11.55□□□□□ -0.56
BNIP3-202ENST00000540159 SRP19P09132 144 aaKnown RBP11.55□□□□□ -0.56
BNIP3-202ENST00000540159 OR8U8P0C7N1 319 aa11.55□□□□□ -0.56
BNIP3-202ENST00000540159 MMP9P14780 707 aa11.55□□□□□ -0.56
BNIP3-202ENST00000540159 S100GP29377 79 aa11.55□□□□□ -0.56
BNIP3-202ENST00000540159 FBXW9Q5XUX1 488 aa11.55□□□□□ -0.56
BNIP3-202ENST00000540159 NECAP1Q8NC96 275 aa11.55□□□□□ -0.56
BNIP3-202ENST00000540159 OR5D13Q8NGL4 314 aa11.55□□□□□ -0.56
BNIP3-202ENST00000540159 MRGPRDQ8TDS7 321 aa11.55□□□□□ -0.56
BNIP3-202ENST00000540159 LINC00470Q9BZP3 86 aa11.55□□□□□ -0.56
BNIP3-202ENST00000540159 OR2D2Q9H210 308 aa11.55□□□□□ -0.56
BNIP3-202ENST00000540159 CLN8Q9UBY8 286 aa11.55□□□□□ -0.56
BNIP3-202ENST00000540159 TRGV5A0A0B4J1U4 118 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 CYB5BO43169 146 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 SYNGR2O43760 224 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 SOX15O60248 233 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 COL8A2P25067 703 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 GABRA2P47869 451 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 UBE2NP61088 152 aaKnown RBP11.54□□□□□ -0.56
BNIP3-202ENST00000540159 PPP1CBP62140 327 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 KIAA0141Q14154 515 aaPredicted RBP11.54□□□□□ -0.56
BNIP3-202ENST00000540159 EDDM3AQ14507 147 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 H1FOOQ8IZA3 346 aaPredicted RBP11.54□□□□□ -0.56
BNIP3-202ENST00000540159 SCGB1C1Q8TD33 95 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 Q8WTZ3 238 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 TRIB1Q96RU8 372 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 CDH20Q9HBT6 801 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 METRNQ9UJH8 293 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 HMGN3Q15651 99 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 PEAR1Q5VY43 1037 aaPredicted RBP11.54□□□□□ -0.56
BNIP3-202ENST00000540159 CDPF1Q6NVV7 123 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 HAPLN4Q86UW8 402 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 DRAM1Q8N682 238 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 ZDHHC16Q969W1 377 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 ABHD14BQ96IU4 210 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 SSX3Q99909 188 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 CEBPZOSA8MTT3 80 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 CLN5O75503 358 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 SSTR5P35346 364 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 ZNF585BQ52M93 769 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 GFI1BQ5VTD9 330 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 SSX9Q7RTT3 188 aa11.54□□□□□ -0.56
BNIP3-202ENST00000540159 TMEM265A0A087WTH1 108 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 KLRC4-KLRK1H3BQV0 150 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 NKX2-8O15522 239 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 CD59P13987 128 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 AGAP20933 346 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 SOX8P57073 446 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 PSG7Q13046 419 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 TBC1D28Q2M2D7 210 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 ZNF787Q6DD87 383 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 Q6P435 159 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 NIPSNAP3BQ9BS92 247 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 SPRY4Q9C004 299 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 SLC25A22Q9H936 323 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 CSMD1Q96PZ7 3565 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 ANKRD11Q6UB99 2663 aaPredicted RBP11.53□□□□□ -0.56
BNIP3-202ENST00000540159 CDX4O14627 284 aaPredicted RBP11.53□□□□□ -0.56
BNIP3-202ENST00000540159 TAS2R30P59541 319 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 ZNF726P1Q15940 193 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 ZNF766Q5HY98 468 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 ZNF880Q6PDB4 577 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 Q8NFD4 153 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 CLDND2Q8NHS1 167 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 BCL2L2Q92843 193 aaPredicted RBP11.53□□□□□ -0.56
BNIP3-202ENST00000540159 SPTA1P02549 2419 aa11.53□□□□□ -0.56
BNIP3-202ENST00000540159 J3QT63 122 aa11.52□□□□□ -0.56
BNIP3-202ENST00000540159 IGHV1-2P23083 117 aa11.52□□□□□ -0.56
BNIP3-202ENST00000540159 UCP2P55851 309 aa11.52□□□□□ -0.56
BNIP3-202ENST00000540159 RPL30P62888 115 aaKnown RBP11.52□□□□□ -0.56
BNIP3-202ENST00000540159 FGFRL1Q8N441 504 aa11.52□□□□□ -0.56
BNIP3-202ENST00000540159 COMMD1Q8N668 190 aa11.52□□□□□ -0.56
BNIP3-202ENST00000540159 LFNGQ8NES3 379 aa11.52□□□□□ -0.56
BNIP3-202ENST00000540159 GATAD1Q8WUU5 269 aa11.52□□□□□ -0.56
BNIP3-202ENST00000540159 OR4C12Q96R67 309 aa11.52□□□□□ -0.56
BNIP3-202ENST00000540159 AURKAIP1Q9NWT8 199 aaPredicted RBP11.52□□□□□ -0.56
BNIP3-202ENST00000540159 KIAA1456Q9P272 454 aa11.52□□□□□ -0.56
BNIP3-202ENST00000540159 TRAV20A0A0B4J274 112 aa11.52□□□□□ -0.57
BNIP3-202ENST00000540159 PRSS44E7EML9 344 aa11.52□□□□□ -0.57
BNIP3-202ENST00000540159 SMPD2O60906 423 aa11.52□□□□□ -0.57
BNIP3-202ENST00000540159 CTXN2P0C2S0 81 aa11.52□□□□□ -0.57
BNIP3-202ENST00000540159 CD46P15529 392 aa11.52□□□□□ -0.57
BNIP3-202ENST00000540159 TUBG1P23258 451 aa11.52□□□□□ -0.57
BNIP3-202ENST00000540159 IL2RGP31785 369 aa11.52□□□□□ -0.57
BNIP3-202ENST00000540159 OR8G1Q15617 311 aa11.52□□□□□ -0.57
BNIP3-202ENST00000540159 VWA1Q6PCB0 445 aa11.52□□□□□ -0.57
BNIP3-202ENST00000540159 Q6ZR03 302 aa11.52□□□□□ -0.57
BNIP3-202ENST00000540159 GNPNAT1Q96EK6 184 aaPredicted RBP11.52□□□□□ -0.57
BNIP3-202ENST00000540159 RTL8AQ9BWD3 113 aa11.52□□□□□ -0.57
BNIP3-202ENST00000540159 MRPS18CQ9Y3D5 142 aaKnown RBP11.52□□□□□ -0.57
BNIP3-202ENST00000540159 MPC1Q9Y5U8 109 aa11.52□□□□□ -0.57
BNIP3-202ENST00000540159 FAM90A10PA6NDY2 464 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 FAM90A18PA6NE21 464 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 FAM90A16PA6NEW6 464 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 FAM90A20PA6NIJ5 464 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 FAM90A8PA6NJQ4 464 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 FAM90A7PA6NKC0 464 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 OR5B21A6NL26 309 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms