RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 GPR31O00270 319 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 DVL1O14640 695 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 GPR37O15354 613 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 NDUFB3O43676 98 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 DNASE1P24855 282 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 GPR6P46095 362 aaPredicted RBP7.05□□□□□ -1.28
VAPB-206ENST00000520497 EDDM3BP56851 147 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 PIGPP57054 158 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 RND3P61587 244 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 LRRC10Q5BKY1 277 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 GSG1LQ6UXU4 331 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 KCTD9Q7L273 389 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 H1FOOQ8IZA3 346 aaPredicted RBP7.05□□□□□ -1.28
VAPB-206ENST00000520497 DRAXINQ8NBI3 349 aaPredicted RBP7.05□□□□□ -1.28
VAPB-206ENST00000520497 ADAD2Q8NCV1 583 aaKnown RBP7.05□□□□□ -1.28
VAPB-206ENST00000520497 OR5M8Q8NGP6 311 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 OR2T35Q8NGX2 323 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 SECTM1Q8WVN6 248 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 CORO2AQ92828 525 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 FYTTD1Q96QD9 318 aaKnown RBP7.05□□□□□ -1.28
VAPB-206ENST00000520497 DCTN5Q9BTE1 182 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 RSRP1Q9BUV0 290 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 CHIAQ9BZP6 476 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 SLC5A7Q9GZV3 580 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 NAA60Q9H7X0 242 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 BARX1Q9HBU1 254 aaPredicted RBP7.05□□□□□ -1.28
VAPB-206ENST00000520497 RAB18Q9NP72 206 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 MIOXQ9UGB7 285 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 MAP1AP78559 2803 aaPredicted RBP7.05□□□□□ -1.28
VAPB-206ENST00000520497 TRGV10A0A0A0MS01 117 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 C5orf51A6NDU8 294 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 CRYM-AS1A6NIL9 109 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 F2RL2O00254 374 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 TUSC2O75896 110 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 HBZP02008 142 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 HEXAP06865 529 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 WNT2P09544 360 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 PET100P0DJ07 73 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 RPS2P15880 293 aaKnown RBP7.04□□□□□ -1.28
VAPB-206ENST00000520497 NDUFB7P17568 137 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 HLA-GP17693 338 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 CXCL3P19876 107 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 NFYAP23511 347 aaPredicted RBP7.04□□□□□ -1.28
VAPB-206ENST00000520497 SSTR5P35346 364 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 PDLIM4P50479 330 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 ATP5J2P56134 94 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 MEF2CQ06413 473 aaPredicted RBP7.04□□□□□ -1.28
VAPB-206ENST00000520497 CD300CQ08708 224 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 SLC9A3R2Q15599 337 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 C17orf58Q2M2W7 97 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 NLRC3Q7RTR2 1065 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 LGI3Q8N145 548 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 PRR18Q8N4B5 295 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 OR10V1Q8NGI7 309 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 OR1L1Q8NH94 360 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 MRGPRDQ8TDS7 321 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 RTN4IP1Q8WWV3 396 aaPredicted RBP7.04□□□□□ -1.28
VAPB-206ENST00000520497 EDARADDQ8WWZ3 215 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 RAB39BQ96DA2 213 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 NEIL1Q96FI4 390 aaPredicted RBP7.04□□□□□ -1.28
VAPB-206ENST00000520497 AKR1E2Q96JD6 320 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 RTBDNQ9BSG5 229 aaPredicted RBP7.04□□□□□ -1.28
VAPB-206ENST00000520497 BPESC1Q9GZL8 116 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 TOLLIPQ9H0E2 274 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 METTL8Q9H825 291 aaKnown RBP7.04□□□□□ -1.28
VAPB-206ENST00000520497 LINC00574Q9H8X3 128 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 PATZ1Q9HBE1 687 aaKnown RBP7.04□□□□□ -1.28
VAPB-206ENST00000520497 SLC2A9Q9NRM0 540 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 C19orf12Q9NSK7 152 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 KCNS2Q9ULS6 477 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 LINC00312Q9Y6C7 94 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 ITPR3Q14573 2671 aa7.04□□□□□ -1.28
VAPB-206ENST00000520497 ABCA1O95477 2261 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 TRBV23-1A0A0A0MS06 115 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 hADV38S2A0JD32 116 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 ZNF729A6NN14 1252 aaPredicted RBP7.03□□□□□ -1.28
VAPB-206ENST00000520497 FAM25EA8MYX2 175 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 VWC2LB2RUY7 222 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 NDUFS8O00217 210 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 OR2A4O95047 310 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 IGHV2-5P01817 119 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 PI3P19957 117 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 CEACAM6P40199 344 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 GZMKP49863 264 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 RPL31P62899 125 aaKnown RBP7.03□□□□□ -1.28
VAPB-206ENST00000520497 HTD2P86397 168 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 ZNF273Q14593 569 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 MSMO1Q15800 293 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 PHLDA2Q53GA4 152 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 WDR25Q64LD2 544 aaPredicted RBP7.03□□□□□ -1.28
VAPB-206ENST00000520497 ZBTB34Q8NCN2 500 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 OR8B3Q8NGG8 313 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 C8orf46Q8TAG6 207 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 UBALD1Q8TB05 177 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 C10orf105Q8TEF2 133 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 ARL11Q969Q4 196 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 TMEM230Q96A57 120 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 GALNT14Q96FL9 552 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 OR2A7Q96R45 310 aa7.03□□□□□ -1.28
VAPB-206ENST00000520497 OR8B2Q96RD0 313 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9141.4 ms