RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 GTSCR1Q86UQ5 136 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 PPP1R27Q86WC6 154 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 TCTEX1D1Q8N7M0 179 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 LFNGQ8NES3 379 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 CLCC1Q96S66 551 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 GABARAPL3Q9BY60 117 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 TAF9BQ9HBM6 251 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 RAB9BQ9NP90 201 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 AASSQ9UDR5 926 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 CEPT1Q9Y6K0 416 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 IZUMO1RA6ND01 250 aa15.47■□□□□ 0.07
SQSTM1-215ENST00000514093 MCRIP1C9JLW8 97 aa15.47■□□□□ 0.07
SQSTM1-215ENST00000514093 TRGV3P03979 118 aa15.47■□□□□ 0.07
SQSTM1-215ENST00000514093 ZNF93P35789 620 aaPredicted RBP15.47■□□□□ 0.07
SQSTM1-215ENST00000514093 PYHIN1Q6K0P9 492 aa15.47■□□□□ 0.07
SQSTM1-215ENST00000514093 CD200R1LQ6Q8B3 271 aa15.47■□□□□ 0.07
SQSTM1-215ENST00000514093 RGP1Q92546 391 aaPredicted RBP15.47■□□□□ 0.07
SQSTM1-215ENST00000514093 MRPS24Q96EL2 167 aaKnown RBP15.47■□□□□ 0.07
SQSTM1-215ENST00000514093 RDH12Q96NR8 316 aa15.47■□□□□ 0.07
SQSTM1-215ENST00000514093 JAM3Q9BX67 310 aa15.47■□□□□ 0.07
SQSTM1-215ENST00000514093 PLEKHA3Q9HB20 300 aa15.47■□□□□ 0.07
SQSTM1-215ENST00000514093 RANGRFQ9HD47 186 aaPredicted RBP15.47■□□□□ 0.07
SQSTM1-215ENST00000514093 IMPAD1Q9NX62 359 aa15.47■□□□□ 0.07
SQSTM1-215ENST00000514093 EXOGQ9Y2C4 368 aaKnown RBP15.47■□□□□ 0.07
SQSTM1-215ENST00000514093 RRHO14718 337 aa15.46■□□□□ 0.07
SQSTM1-215ENST00000514093 ARPC1BO15143 372 aaKnown RBP15.46■□□□□ 0.07
SQSTM1-215ENST00000514093 BRI3O95415 125 aa15.46■□□□□ 0.07
SQSTM1-215ENST00000514093 TMEM30BQ3MIR4 351 aa15.46■□□□□ 0.07
SQSTM1-215ENST00000514093 DDI2Q5TDH0 399 aa15.46■□□□□ 0.07
SQSTM1-215ENST00000514093 FAM131AQ6UXB0 335 aa15.46■□□□□ 0.07
SQSTM1-215ENST00000514093 ZNF833PQ6ZTB9 187 aa15.46■□□□□ 0.07
SQSTM1-215ENST00000514093 ORAI1Q96D31 301 aa15.46■□□□□ 0.07
SQSTM1-215ENST00000514093 LGALS12Q96DT0 336 aa15.46■□□□□ 0.07
SQSTM1-215ENST00000514093 ADAM30Q9UKF2 790 aa15.46■□□□□ 0.07
SQSTM1-215ENST00000514093 RNF150Q9ULK6 438 aa15.46■□□□□ 0.07
SQSTM1-215ENST00000514093 SAA2-SAA4A0A096LPE2 208 aa15.45■□□□□ 0.06
SQSTM1-215ENST00000514093 GYG2O15488 501 aa15.45■□□□□ 0.06
SQSTM1-215ENST00000514093 SAA2P0DJI9 122 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-215ENST00000514093 GTF2F2P13984 249 aa15.45■□□□□ 0.06
SQSTM1-215ENST00000514093 ZP3P21754 424 aa15.45■□□□□ 0.06
SQSTM1-215ENST00000514093 GTF2A1P52655 376 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-215ENST00000514093 SYNJ2BPP57105 145 aa15.45■□□□□ 0.06
SQSTM1-215ENST00000514093 AKIRIN2Q53H80 203 aa15.45■□□□□ 0.06
SQSTM1-215ENST00000514093 RNLSQ5VYX0 342 aa15.45■□□□□ 0.06
SQSTM1-215ENST00000514093 RAB12Q6IQ22 244 aa15.45■□□□□ 0.06
SQSTM1-215ENST00000514093 LINC00322Q6ZN03 302 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-215ENST00000514093 OR9G4Q8NGQ1 327 aa15.45■□□□□ 0.06
SQSTM1-215ENST00000514093 ZNF355PQ9NSJ1 428 aa15.45■□□□□ 0.06
SQSTM1-215ENST00000514093 RCC2Q9P258 522 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-215ENST00000514093 FASP25445 335 aa15.44■□□□□ 0.06
SQSTM1-215ENST00000514093 CD40LGP29965 261 aa15.44■□□□□ 0.06
SQSTM1-215ENST00000514093 KLF5Q13887 457 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-215ENST00000514093 GLDNQ6ZMI3 551 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-215ENST00000514093 SYS1Q8N2H4 156 aa15.44■□□□□ 0.06
SQSTM1-215ENST00000514093 TRUB1Q8WWH5 349 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-215ENST00000514093 MRPL48Q96GC5 212 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-215ENST00000514093 SLA2Q9H6Q3 261 aa15.44■□□□□ 0.06
SQSTM1-215ENST00000514093 TMEM138Q9NPI0 162 aa15.44■□□□□ 0.06
SQSTM1-215ENST00000514093 PAK1IP1Q9NWT1 392 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-215ENST00000514093 PEX16Q9Y5Y5 336 aa15.44■□□□□ 0.06
SQSTM1-215ENST00000514093 UBE2QL1A1L167 161 aa15.43■□□□□ 0.06
SQSTM1-215ENST00000514093 GAPTQ8N292 157 aa15.43■□□□□ 0.06
SQSTM1-215ENST00000514093 SPACA1Q9HBV2 294 aa15.43■□□□□ 0.06
SQSTM1-215ENST00000514093 C13orf42A0A1B0GVH6 325 aa15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 SHISA3A0PJX4 238 aa15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 ZNF780AO75290 641 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 FADS2O95864 444 aaKnown RBP15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 CSN3P07498 182 aa15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 FSTP19883 344 aa15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 BDKRB2P30411 391 aa15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 GBX2P52951 348 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 DEFA5Q01523 94 aa15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 DNAL1Q4LDG9 190 aa15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 SLC25A30Q5SVS4 291 aa15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 LCN12Q6JVE5 192 aa15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 TRAT1Q6PIZ9 186 aa15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 CCDC197Q8NCU1 140 aa15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 TMEM106AQ96A25 262 aa15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 KCNIP1Q9NZI2 227 aa15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 JPT1Q9UK76 154 aa15.42■□□□□ 0.06
SQSTM1-215ENST00000514093 MAS1P04201 325 aa15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 TFAP2AP05549 437 aa15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 CD2P06729 351 aa15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 GSTP1P09211 210 aaKnown RBP15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 CT45A6P0DMU7 189 aa15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 CT45A5P0DMU8 189 aa15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 CT45A7P0DMV0 189 aa15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 SNRPGP62308 76 aaKnown RBP15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 PPP3R1P63098 170 aa15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 RPL39P5Q59GN2 51 aa15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 MEDAGQ5VYS4 303 aa15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 Q8N402 240 aa15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 OR5T1Q8NG75 326 aa15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 GPR148Q8TDV2 347 aa15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 ZNF184Q99676 751 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 ERVK13-1Q9NX77 482 aa15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 METTL1Q9UBP6 276 aaKnown RBP15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 OAZ3Q9UMX2 235 aa15.41■□□□□ 0.06
SQSTM1-215ENST00000514093 SAC3D1A6NKF1 404 aa15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 ST8SIA5O15466 376 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms