RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 Q6ZPA2 131 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 MRPL43Q8N983 215 aaKnown RBP6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 CLEC18CQ8NCF0 446 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 OR2D3Q8NGH3 330 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 SPPL3Q8TCT6 385 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 ORAOV1Q8WV07 137 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 IL1F10Q8WWZ1 152 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 PTX4Q96A99 478 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 GNB4Q9HAV0 340 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 SEPSECSQ9HD40 501 aaKnown RBP6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 LYRM2Q9NU23 88 aaPredicted RBP6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 PXMP4Q9Y6I8 212 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 RALGAPA1Q6GYQ0 2036 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 MUC21A0A0G2JKD1 596 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 MUC21A0A140T8X8 626 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 SNURFLB1AK76 121 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 KBTBD11O94819 623 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 CA1P00915 261 aaPredicted RBP6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 HBE1P02100 147 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 SCTP09683 121 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 C3orf79P0CE67 100 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 TNFSF4P23510 183 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 CD38P28907 300 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 EFNA3P52797 238 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 MUC21Q5SSG8 566 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 CTHRC1Q96CG8 243 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 GNPNAT1Q96EK6 184 aaPredicted RBP6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 WDYHV1Q96HA8 205 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 COX14Q96I36 57 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 HS3ST6Q96QI5 342 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 LRFN3Q9BTN0 628 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 TXNIPQ9H3M7 391 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 UQCR10Q9UDW1 63 aa6.22□□□□□ -1.41
LIMCH1-207ENST00000508466 ICE1Q9Y2F5 2266 aa6.21□□□□□ -1.41
LIMCH1-207ENST00000508466 IGHV2-70DA0A0C4DH43 119 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 CEACAM18A8MTB9 384 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 PLPP3O14495 311 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 CELA2BP08218 269 aaPredicted RBP6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 PPP1CBP62140 327 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 RPS15AP62244 130 aaKnown RBP6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 PCED1AQ9H1Q7 454 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 S1PR5Q9H228 398 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 TMEM242Q9NWH2 141 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 ARL2-SNX15V9GYD0 113 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 hDV102S1A0JD36 115 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 DPRXA6NFQ7 191 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 MS4A18H0YCH9 400 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 HOXA2O43364 376 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 ZIC3O60481 467 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 GPR6P46095 362 aaPredicted RBP6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 PSMB3P49720 205 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 EIF3IQ13347 325 aaKnown RBP6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 GABRA6Q16445 453 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 MS4A18Q3C1V0 323 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 RIPPLY2Q5TAB7 128 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 FAM53AQ6NSI3 398 aaPredicted RBP6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 ACSM6Q6P461 480 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 CYP2G1PQ6ZSU1 146 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 LINC01551Q86U37 167 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 SELENOHQ8IZQ5 122 aaKnown RBP6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 FAM58AQ8N1B3 248 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 CISD2Q8N5K1 135 aaKnown RBP6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 Q8N976 141 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 ZNF519Q8TB69 540 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 BAHD1Q8TBE0 780 aaPredicted RBP6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 ZNF721Q8TF20 911 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 LYZL4Q96KX0 146 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 ZFYVE21Q9BQ24 234 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 PYGO2Q9BRQ0 406 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 CTDSP1Q9GZU7 261 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 NECAP2Q9NVZ3 263 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 IL36RNQ9UBH0 155 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 PPP1R3CQ9UQK1 317 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 LHFPL6Q9Y693 200 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 ATP23Q9Y6H3 246 aa6.21□□□□□ -1.42
LIMCH1-207ENST00000508466 FER1L5A0AVI2 2057 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 TRAV8-6A0A0B4J262 113 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 ZNF732B4DXR9 585 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 TRDCB7Z8K6 153 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 C11orf94C9JXX5 98 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 ZNF253O75346 499 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 SERPINE2P07093 398 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 SLC35E2P0CK97 266 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 LINC00205P59089 165 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 ZP4Q12836 540 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 C2orf27AQ580R0 203 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 TRIM61Q5EBN2 209 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 KCNIP4Q6PIL6 250 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 CRIP3Q6Q6R5 217 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 C1orf174Q8IYL3 243 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 H1FOOQ8IZA3 346 aaPredicted RBP6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 MRGPRDQ8TDS7 321 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 RHBDD1Q8TEB9 315 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 RAB37Q96AX2 223 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 SMDT1Q9H4I9 107 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 FSCN3Q9NQT6 498 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 DEPPQ9NTK1 212 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 ZNF586Q9NXT0 402 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 TAAR3PQ9P1P4 343 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 CLCF1Q9UBD9 225 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms