RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 TMEM239Q8WW34 195 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 OSTF1Q92882 214 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 CENPNQ96H22 339 aaPredicted RBP4□□□□□ -1.77
NIPBL-205ENST00000505998 C14orf144Q96I85 54 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 RNF170Q96K19 258 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 CNBD2Q96M20 576 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 RDH12Q96NR8 316 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 C19orf24Q9BVV8 132 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 TMEM27Q9HBJ8 222 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 DKKL1Q9UK85 242 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 SIGLEC7Q9Y286 467 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 KCNIP3Q9Y2W7 256 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 GOLT1BQ9Y3E0 138 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 FASNP49327 2511 aaKnown RBP4□□□□□ -1.77
NIPBL-205ENST00000505998 PLCE1Q9P212 2302 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 A0A075B6Q4 140 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 BTBD17A6NE02 478 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 CCDC182A6NF36 153 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 CPSF4LA6NMK7 179 aaKnown RBP3.99□□□□□ -1.77
NIPBL-205ENST00000505998 FAM166BA8MTA8 275 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 K7EQM0 130 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 DLGAP1O14490 977 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 ARPC3O15145 178 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 SLC19A2O60779 497 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 SS18L1O75177 396 aaPredicted RBP3.99□□□□□ -1.77
NIPBL-205ENST00000505998 EIF3GO75821 320 aaKnown RBP eCLIP3.99□□□□□ -1.77
NIPBL-205ENST00000505998 SERF1AO75920 110 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 GADD45GO95257 159 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 CST1P01037 141 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 PTNP21246 168 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 CCNOP22674 350 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 CEACAM6P40199 344 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 RFC3P40938 356 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 RPS5P46782 204 aaKnown RBP3.99□□□□□ -1.77
NIPBL-205ENST00000505998 HNRNPA3P51991 378 aaKnown RBP3.99□□□□□ -1.77
NIPBL-205ENST00000505998 TAS2R41P59536 307 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 DEFA1P59665 94 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 DEFA3P59666 94 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 CXCR4P61073 352 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 HOXC5Q00444 222 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 PLGLB1Q02325 96 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 LAGE3Q14657 143 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 HIST3H3Q16695 136 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 RFX4Q33E94 735 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 FBXL19-AS1Q494R0 122 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 ACTBL2Q562R1 376 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 CLLU1Q5K131 121 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 RAET1LQ5VY80 246 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 CYB5R2Q6BCY4 276 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 TMEM225Q6GV28 225 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 UFSP1Q6NVU6 142 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 ZNF620Q6ZNG0 422 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 DNM1P46Q6ZS02 220 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 RASSF6Q6ZTQ3 369 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 TMEM179BQ7Z7N9 219 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 CYP4Z1Q86W10 505 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 DOLPP1Q86YN1 238 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 NRMQ8IXM6 262 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 TCTE3Q8IZS6 198 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 DHRSXQ8N5I4 330 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 EIF4E3Q8N5X7 224 aaKnown RBP3.99□□□□□ -1.77
NIPBL-205ENST00000505998 STEAP2Q8NFT2 490 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 OR2D3Q8NGH3 330 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 OR10D3Q8NH80 312 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 OR5K1Q8NHB7 308 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 ZNF563Q8TA94 476 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 RBPMSQ93062 196 aaKnown RBP3.99□□□□□ -1.77
NIPBL-205ENST00000505998 DDIT4LQ96D03 193 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 NARS2Q96I59 477 aaKnown RBP3.99□□□□□ -1.77
NIPBL-205ENST00000505998 FAM210BQ96KR6 192 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 WFIKKN1Q96NZ8 548 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 PITX2Q99697 317 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 ZNF2Q9BSG1 426 aaPredicted RBP3.99□□□□□ -1.77
NIPBL-205ENST00000505998 TMED9Q9BVK6 235 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 GABARAPL3Q9BY60 117 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 SRXN1Q9BYN0 137 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 UCK2Q9BZX2 261 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 OR11A1Q9GZK7 315 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 ACTR6Q9GZN1 396 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 MFFQ9GZY8 342 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 DNTTIP1Q9H147 329 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 REEP1Q9H902 201 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 MED9Q9NWA0 146 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 SMPD3Q9NY59 655 aaPredicted RBP3.99□□□□□ -1.77
NIPBL-205ENST00000505998 MED31Q9Y3C7 131 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 TENM4Q6N022 2769 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 PRR14LQ5THK1 2151 aa3.99□□□□□ -1.77
NIPBL-205ENST00000505998 A6NIZ1 184 aa3.98□□□□□ -1.77
NIPBL-205ENST00000505998 ZFP92A6NM28 416 aa3.98□□□□□ -1.77
NIPBL-205ENST00000505998 RPL36A-HNRNPH2H7BZ11 118 aa3.98□□□□□ -1.77
NIPBL-205ENST00000505998 TNFRSF11BO00300 401 aa3.98□□□□□ -1.77
NIPBL-205ENST00000505998 BHLHE40O14503 412 aa3.98□□□□□ -1.77
NIPBL-205ENST00000505998 TNFSF13O75888 250 aa3.98□□□□□ -1.77
NIPBL-205ENST00000505998 DIRAS1O95057 198 aa3.98□□□□□ -1.77
NIPBL-205ENST00000505998 RCBTB2O95199 551 aa3.98□□□□□ -1.77
NIPBL-205ENST00000505998 PPBPP02775 128 aa3.98□□□□□ -1.77
NIPBL-205ENST00000505998 ZNF735P0CB33 412 aa3.98□□□□□ -1.77
NIPBL-205ENST00000505998 GSTM3P21266 225 aa3.98□□□□□ -1.77
NIPBL-205ENST00000505998 CXCR1P25024 350 aa3.98□□□□□ -1.77
NIPBL-205ENST00000505998 ARF6P62330 175 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms