RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	NUBP2	Q9Y5Y2	271 aa		10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	PEX16	Q9Y5Y5	336 aa		10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	PLEC	Q15149	4684 aa	Known RBP	10.51	□□□□□ -0.73
SAMM50-204	ENST00000493161	TRAV8-7	A0A075B6U6	113 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	ZNF780A	O75290	641 aa	Predicted RBP	10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	VEGFC	P49767	419 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	ETV1	P50549	477 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	CRIP2	P52943	208 aa	Predicted RBP	10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	PITPNA	Q00169	270 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	RAB40B	Q12829	278 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	RIPK1	Q13546	671 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	TMEM30B	Q3MIR4	351 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	OR2G6	Q5TZ20	316 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	SIGIRR	Q6IA17	410 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	RPL22L1	Q6P5R6	122 aa	Known RBP	10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	GLIPR1L1	Q6UWM5	242 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	ZNF833P	Q6ZTB9	187 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	RHOXF1	Q8NHV9	184 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	PYDC1	Q8WXC3	89 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	MUL1	Q969V5	352 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	FAM103A1	Q9BTL3	118 aa	Known RBP	10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	KIAA1456	Q9P272	454 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	MRPS28	Q9Y2Q9	187 aa	Known RBP	10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	ORC6	Q9Y5N6	252 aa		10.5	□□□□□ -0.73
SAMM50-204	ENST00000493161	SAA2-SAA4	A0A096LPE2	208 aa		10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161		A8MZ25	164 aa		10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	SC5D	O75845	299 aa		10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	LALBA	P00709	142 aa		10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	IGLV1-51	P01701	117 aa		10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	HSPB1	P04792	205 aa	Known RBP	10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	SAA2	P0DJI9	122 aa	Predicted RBP	10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	HAGH	Q16775	308 aa		10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	FAM131A	Q6UXB0	335 aa		10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	MRPL30	Q8TCC3	161 aa	Known RBP	10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	APH1B	Q8WW43	257 aa		10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	MYCBP	Q99417	103 aa	Predicted RBP	10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	RSRP1	Q9BUV0	290 aa		10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	CST11	Q9H112	138 aa		10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	SPACA1	Q9HBV2	294 aa		10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	MBNL3	Q9NUK0	354 aa	Known RBP	10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	MRPS18A	Q9NVS2	196 aa	Known RBP	10.49	□□□□□ -0.73
SAMM50-204	ENST00000493161	TRBV5-5	A0A0J9YX44	114 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	HSPA12A	O43301	675 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	MAS1	P04201	325 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	ALDH3A2	P51648	485 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	SMN1	Q16637	294 aa	Known RBP	10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	ZNF660	Q6AZW8	331 aa	Predicted RBP	10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	TRAT1	Q6PIZ9	186 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	GLDN	Q6ZMI3	551 aa	Predicted RBP	10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	LYPD6	Q86Y78	171 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	CBR4	Q8N4T8	237 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	ABHD5	Q8WTS1	349 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	MRPS24	Q96EL2	167 aa	Known RBP	10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	RHOV	Q96L33	236 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	CLCC1	Q96S66	551 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	KRTAP17-1	Q9BYP8	105 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	SELENOI	Q9C0D9	397 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	IFI27L2	Q9H2X8	130 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	RETN	Q9HD89	108 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	RAB9B	Q9NP90	201 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	CHCHD3	Q9NX63	227 aa	Known RBP	10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161	JPT1	Q9UK76	154 aa		10.48	□□□□□ -0.73
SAMM50-204	ENST00000493161		A0A1W2PPK0	400 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161		H3BNX3	289 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	RRH	O14718	337 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	ST8SIA5	O15466	376 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	OGG1	O15527	345 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	YPEL1	O60688	119 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	CT45A6	P0DMU7	189 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	CT45A5	P0DMU8	189 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	CT45A7	P0DMV0	189 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	ARSB	P15848	533 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	MGMT	P16455	207 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	FUT3	P21217	361 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	TPPP2	P59282	170 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	RPS11	P62280	158 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	GPR176	Q14439	515 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	CCDC58	Q4VC31	144 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	ACTBL2	Q562R1	376 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	RPL39P5	Q59GN2	51 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	UNQ5815/PRO19632	Q6UWF5	114 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	PPP1R27	Q86WC6	154 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	SGPP2	Q8IWX5	399 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	JAGN1	Q8N5M9	183 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	LFNG	Q8NES3	379 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	FLYWCH2	Q96CP2	140 aa	Known RBP	10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	YPEL2	Q96QA6	119 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	SPATA25	Q9BR10	227 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	PARP12	Q9H0J9	701 aa	Known RBP	10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	FGF20	Q9NP95	211 aa	Predicted RBP	10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	KCNIP1	Q9NZI2	227 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	CNOT2	Q9NZN8	540 aa	Known RBP	10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	STUB1	Q9UNE7	303 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	ERGIC3	Q9Y282	383 aa		10.47	□□□□□ -0.73
SAMM50-204	ENST00000493161	GPX5	O75715	221 aa		10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161	BAG2	O95816	211 aa		10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161	HTD2	P86397	168 aa		10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161	PLGLA	Q15195	96 aa		10.46	□□□□□ -0.73
SAMM50-204	ENST00000493161	AWAT2	Q6E213	333 aa		10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 1208.1 ms