RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 AKR7A2O43488 359 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 CYTH3O43739 400 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 ZNF737O75373 536 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 NPPAP01160 153 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 CRPP02741 224 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 RPSAP08865 295 aaKnown RBP0.1□□□□□ -2.39
CCDC93-209ENST00000488908 GIMD1P0DJR0 217 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 GPX2P18283 190 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 CD24P25063 80 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 UGT2B10P36537 528 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 ACTR1BP42025 376 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 BCAP31P51572 246 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 SPAG1Q07617 926 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 CDK5R1Q15078 307 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 PDGFRLQ15198 375 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 HIKESHIQ53FT3 197 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 HENMT1Q5T8I9 393 aaKnown RBP0.1□□□□□ -2.39
CCDC93-209ENST00000488908 HBMQ6B0K9 141 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 OR10K2Q6IF99 312 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 FAM43BQ6ZT52 329 aaPredicted RBP0.1□□□□□ -2.39
CCDC93-209ENST00000488908 FAM183BPQ6ZVS7 135 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 TMCO2Q7Z6W1 182 aaPredicted RBP0.1□□□□□ -2.39
CCDC93-209ENST00000488908 SUN5Q8TC36 379 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 ASB17Q8WXJ9 295 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 ZNF396Q96N95 335 aaPredicted RBP0.1□□□□□ -2.39
CCDC93-209ENST00000488908 MRPL57Q9BQC6 102 aaKnown RBP0.1□□□□□ -2.39
CCDC93-209ENST00000488908 ACBD6Q9BR61 282 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 UTP23Q9BRU9 249 aaKnown RBP0.1□□□□□ -2.39
CCDC93-209ENST00000488908 COPS4Q9BT78 406 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 DOHHQ9BU89 302 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 ADAT1Q9BUB4 502 aaKnown RBP0.1□□□□□ -2.39
CCDC93-209ENST00000488908 SYT4Q9H2B2 425 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 CST9LQ9H4G1 147 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 METTL8Q9H825 291 aaKnown RBP0.1□□□□□ -2.39
CCDC93-209ENST00000488908 HHLA3Q9XRX5 114 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 KLK5Q9Y337 293 aaPredicted RBP0.1□□□□□ -2.39
CCDC93-209ENST00000488908 RRP15Q9Y3B9 282 aaKnown RBP0.1□□□□□ -2.39
CCDC93-209ENST00000488908 C22orf24Q9Y442 160 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 MACF1Q9UPN3 7388 aaKnown RBP0.1□□□□□ -2.39
CCDC93-209ENST00000488908 ARFGEF3Q5TH69 2177 aa0.09□□□□□ -2.39
CCDC93-209ENST00000488908 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.09□□□□□ -2.4
CCDC93-209ENST00000488908 LINC00862A6NCI5 91 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 OR5K4A6NMS3 321 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 C9J4A7 227 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 K7EN84 100 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 ENSAO43768 121 aaKnown RBP0.09□□□□□ -2.4
CCDC93-209ENST00000488908 STAG3L3P0CL85 134 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 ZNF728P0DKX0 622 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 NPPCP23582 126 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 CALRP27797 417 aaKnown RBP0.09□□□□□ -2.4
CCDC93-209ENST00000488908 PEX19P40855 299 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 RANBP1P43487 201 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 XCL1P47992 114 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 DEFA6Q01524 100 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 STK38Q15208 465 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 SURF2Q15527 256 aaPredicted RBP0.09□□□□□ -2.4
CCDC93-209ENST00000488908 TRIP13Q15645 432 aaPredicted RBP0.09□□□□□ -2.4
CCDC93-209ENST00000488908 TMEM155Q4W5P6 130 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 FP248Q71RG6 208 aaPredicted RBP0.09□□□□□ -2.4
CCDC93-209ENST00000488908 FAM19A1Q7Z5A9 133 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 OR51L1Q8NGJ5 315 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 ANGPTL6Q8NI99 470 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 SLC7A6Q92536 515 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 CIB1Q99828 191 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 MED18Q9BUE0 208 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 MAP1LC3CQ9BXW4 147 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 GTSF1LQ9H1H1 148 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 ANKHQ9HCJ1 492 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 HHLA2Q9UM44 414 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 BAZ2BQ9UIF8 2168 aaKnown RBP0.09□□□□□ -2.4
CCDC93-209ENST00000488908 ADAMTSL1Q8N6G6 1762 aa0.09□□□□□ -2.4
CCDC93-209ENST00000488908 CACNA1BQ00975 2339 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 GOLGA8IPA6NC78 632 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 SLC17A3O00476 420 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 STK16O75716 305 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 VAPBO95292 243 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 IGHV1-69P01742 117 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 BGNP21810 368 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 OPRM1P35372 400 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 DEKP35659 375 aaKnown RBP0.08□□□□□ -2.4
CCDC93-209ENST00000488908 FGF12P61328 243 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 ACTL10Q5JWF8 245 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 FAHD1Q6P587 224 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 ASCL4Q6XD76 172 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 FAM19A2Q8N3H0 131 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 OR5D18Q8NGL1 313 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 OR4P4Q8NGL7 312 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 OR11L1Q8NGX0 322 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 OR5K1Q8NHB7 308 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 MBD3L1Q8WWY6 194 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 CHID1Q9BWS9 393 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 VCX3BQ9H321 246 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 TMEM216Q9P0N5 145 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 GLS2Q9UI32 602 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 SNURFQ9Y675 71 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 PTPRBP23467 1997 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 BRWD1Q9NSI6 2320 aa0.08□□□□□ -2.4
CCDC93-209ENST00000488908 A0A1W2PPV4 95 aa0.07□□□□□ -2.4
CCDC93-209ENST00000488908 A0A1W2PQD3 144 aa0.07□□□□□ -2.4
CCDC93-209ENST00000488908 TRAPPC13A5PLN9 417 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms