RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 DSCAMO60469 2012 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 GATBO75879 557 aaKnown RBP2.89□□□□□ -1.95
UBR3-209ENST00000477461 NRASP01111 189 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 PRB2P02812 416 aaPredicted RBP2.89□□□□□ -1.95
UBR3-209ENST00000477461 ISG15P05161 165 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 ERCC1P07992 297 aaPredicted RBP2.89□□□□□ -1.95
UBR3-209ENST00000477461 OR4A8P0C604 315 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 RAB3AP20336 220 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 CCL1P22362 96 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 GALP22466 123 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 PRKACBP22694 351 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 GADD45AP24522 165 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 TGFBR2P37173 567 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 MPV17P39210 176 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 RANBP1P43487 201 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 ALDH3B2P48448 385 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 SNRPD2P62316 118 aaKnown RBP2.89□□□□□ -1.95
UBR3-209ENST00000477461 FAM3AP98173 230 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 TLE4Q04727 773 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 OR8G1Q15617 311 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 SSX1Q16384 188 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 ACSM3Q53FZ2 586 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 HSD17B12Q53GQ0 312 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 CLVS2Q5SYC1 327 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 GPR107Q5VW38 600 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 PLCXD3Q63HM9 321 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 OR2T2Q6IF00 324 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 CLEC18BQ6UXF7 455 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 FBXW12Q6X9E4 464 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 CLVS1Q8IUQ0 354 aaPredicted RBP2.89□□□□□ -1.95
UBR3-209ENST00000477461 RDH10Q8IZV5 341 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 SPERTQ8NA61 448 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 BHLHE23Q8NDY6 225 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 OR8G5Q8NG78 346 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 OR5D14Q8NGL3 314 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 OR13F1Q8NGS4 319 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 OR13C9Q8NGT0 318 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 OR13G1Q8NGZ3 307 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 OR10AC1Q8NH08 325 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 OR8S1Q8NH09 359 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 RPS4Y2Q8TD47 263 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 KLF14Q8TD94 323 aaPredicted RBP2.89□□□□□ -1.95
UBR3-209ENST00000477461 PP6455Q8WZ26 134 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 PIGCQ92535 297 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 PHYHIPQ92561 330 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 TMEM106AQ96A25 262 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 FGGYQ96C11 551 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 C10orf35Q96D05 121 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 HAVCR1Q96D42 359 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 CPNE2Q96FN4 548 aaPredicted RBP2.89□□□□□ -1.95
UBR3-209ENST00000477461 PGLYRP3Q96LB9 341 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 CXorf58Q96LI9 332 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 KCTD7Q96MP8 289 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 TECTBQ96PL2 329 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 GPER1Q99527 375 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 S100A13Q99584 98 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 MICU1Q9BPX6 476 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 SLC22A4Q9H015 551 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 ABCB9Q9NP78 766 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 CA10Q9NS85 328 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 ZNF275Q9NSD4 429 aaPredicted RBP2.89□□□□□ -1.95
UBR3-209ENST00000477461 TMEM100Q9NV29 134 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 NDUFA13Q9P0J0 144 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 TAAR3PQ9P1P4 343 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 PURGQ9UJV8 347 aaKnown RBP2.89□□□□□ -1.95
UBR3-209ENST00000477461 FZR1Q9UM11 496 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 RNF24Q9Y225 148 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 V9GYS6 101 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 ABCA4P78363 2273 aa2.89□□□□□ -1.95
UBR3-209ENST00000477461 PLCE1Q9P212 2302 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 ANKHD1Q8IWZ3 2542 aaKnown RBP2.88□□□□□ -1.95
UBR3-209ENST00000477461 IGLV3-9A0A075B6K5 115 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 SMIM31A0A1B0GVY4 71 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 FAM230AA0A1W2PPH8 454 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 FAM168BA1KXE4 195 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 A6NIN4 97 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 OR5B21A6NL26 309 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 SLC22A1O15245 554 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 SULT1B1O43704 296 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 GMDSO60547 372 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 ZNF253O75346 499 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 CYB5AP00167 134 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 CST4P01036 141 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 IGLV3-1P01715 115 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 MAS1P04201 325 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 UCHL1P09936 223 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 AREGP15514 252 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 ZNF250P15622 560 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 ATF1P18846 271 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 SRMP19623 302 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 KITLGP21583 273 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 CALRP27797 417 aaKnown RBP2.88□□□□□ -1.95
UBR3-209ENST00000477461 FGF9P31371 208 aaPredicted RBP2.88□□□□□ -1.95
UBR3-209ENST00000477461 SERPINB10P48595 397 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 SRP9P49458 86 aaKnown RBP2.88□□□□□ -1.95
UBR3-209ENST00000477461 EVX1P49640 407 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 PSMD7P51665 324 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 CNN1P51911 297 aaKnown RBP2.88□□□□□ -1.95
UBR3-209ENST00000477461 ATP1B3P54709 279 aa2.88□□□□□ -1.95
UBR3-209ENST00000477461 TMBIM6P55061 237 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms