RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 YPEL2Q96QA6 119 aa17.71■□□□□ 0.43
USP42-205ENST00000465073 ASCL2Q99929 193 aa17.71■□□□□ 0.43
USP42-205ENST00000465073 NABP2Q9BQ15 211 aa17.71■□□□□ 0.43
USP42-205ENST00000465073 UQCC2Q9BRT2 126 aa17.71■□□□□ 0.43
USP42-205ENST00000465073 MRPL20Q9BYC9 149 aaKnown RBP17.71■□□□□ 0.43
USP42-205ENST00000465073 LRRC42Q9Y546 428 aa17.71■□□□□ 0.43
USP42-205ENST00000465073 TRAV41A0A0B4J266 112 aa17.7■□□□□ 0.42
USP42-205ENST00000465073 ATP6V0E1O15342 81 aa17.7■□□□□ 0.42
USP42-205ENST00000465073 NBR2O15453 112 aa17.7■□□□□ 0.42
USP42-205ENST00000465073 ST3GAL4Q11206 333 aa17.7■□□□□ 0.42
USP42-205ENST00000465073 C5orf64Q2M2E5 130 aa17.7■□□□□ 0.42
USP42-205ENST00000465073 LIN54Q6MZP7 749 aa17.7■□□□□ 0.42
USP42-205ENST00000465073 NKAIN3Q8N8D7 197 aa17.7■□□□□ 0.42
USP42-205ENST00000465073 SETD9Q8NE22 299 aa17.7■□□□□ 0.42
USP42-205ENST00000465073 RITA1Q96K30 269 aa17.7■□□□□ 0.42
USP42-205ENST00000465073 ANKRD60Q9BZ19 345 aa17.7■□□□□ 0.42
USP42-205ENST00000465073 PARP11Q9NR21 331 aa17.7■□□□□ 0.42
USP42-205ENST00000465073 GHRLQ9UBU3 117 aa17.7■□□□□ 0.42
USP42-205ENST00000465073 IGHV7-81A0A0B4J1V7 117 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 RAB9AP51151 201 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 ASPHD1Q5U4P2 390 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 ZNF833PQ6ZTB9 187 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 NPBQ8NG41 125 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 CYGBQ8WWM9 190 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 THRSPQ92748 146 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 GGHQ92820 318 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 GALMQ96C23 342 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 ERGIC3Q9Y282 383 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 PNMA8CA0A1B0GUJ8 204 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 C3orf84H3BNL1 204 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 LY86O95711 162 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 CD1AP06126 327 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 CNTFRP26992 372 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 GNB1P62873 340 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 ZNF429Q86V71 674 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 MINDY2Q8NBR6 621 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 OR5B12Q96R08 314 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 CST11Q9H112 138 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 SMAD5-AS1Q9Y6J3 95 aa17.69■□□□□ 0.42
USP42-205ENST00000465073 EFCAB10A6NFE3 127 aa17.68■□□□□ 0.42
USP42-205ENST00000465073 MAPK3P27361 379 aaPredicted RBP17.68■□□□□ 0.42
USP42-205ENST00000465073 BLVRBP30043 206 aaPredicted RBP17.68■□□□□ 0.42
USP42-205ENST00000465073 C6orf141Q5SZD1 244 aa17.68■□□□□ 0.42
USP42-205ENST00000465073 FAM27D1Q5T7N8 215 aa17.68■□□□□ 0.42
USP42-205ENST00000465073 C5orf24Q7Z6I8 188 aa17.68■□□□□ 0.42
USP42-205ENST00000465073 FAM46BQ96A09 425 aa17.68■□□□□ 0.42
USP42-205ENST00000465073 KIAA1456Q9P272 454 aa17.68■□□□□ 0.42
USP42-205ENST00000465073 NDUFA3O95167 84 aa17.67■□□□□ 0.42
USP42-205ENST00000465073 CELP19835 753 aa17.67■□□□□ 0.42
USP42-205ENST00000465073 OR3A3P47888 321 aa17.67■□□□□ 0.42
USP42-205ENST00000465073 OR2AK2Q8NG84 335 aa17.67■□□□□ 0.42
USP42-205ENST00000465073 DCUN1D4Q92564 292 aa17.67■□□□□ 0.42
USP42-205ENST00000465073 CYYR1Q96J86 154 aa17.67■□□□□ 0.42
USP42-205ENST00000465073 NEDD4LQ96PU5 975 aa17.67■□□□□ 0.42
USP42-205ENST00000465073 SAA2-SAA4A0A096LPE2 208 aa17.66■□□□□ 0.42
USP42-205ENST00000465073 OVOL1O14753 267 aa17.66■□□□□ 0.42
USP42-205ENST00000465073 SAA2P0DJI9 122 aaPredicted RBP17.66■□□□□ 0.42
USP42-205ENST00000465073 C8orf4Q9NR00 106 aa17.66■□□□□ 0.42
USP42-205ENST00000465073 CNOT2Q9NZN8 540 aaKnown RBP17.66■□□□□ 0.42
USP42-205ENST00000465073 ABRACLQ9P1F3 81 aa17.66■□□□□ 0.42
USP42-205ENST00000465073 STEAP1Q9UHE8 339 aa17.66■□□□□ 0.42
USP42-205ENST00000465073 SORL1Q92673 2214 aa17.66■□□□□ 0.42
USP42-205ENST00000465073 UBBP0CG47 229 aa17.65■□□□□ 0.42
USP42-205ENST00000465073 HMGN3Q15651 99 aa17.65■□□□□ 0.42
USP42-205ENST00000465073 LRRC36Q1X8D7 754 aa17.65■□□□□ 0.42
USP42-205ENST00000465073 ZNF660Q6AZW8 331 aaPredicted RBP17.65■□□□□ 0.42
USP42-205ENST00000465073 FAM71F2Q6NXP2 309 aa17.65■□□□□ 0.42
USP42-205ENST00000465073 DHRSXQ8N5I4 330 aa17.65■□□□□ 0.42
USP42-205ENST00000465073 SULT4A1Q9BR01 284 aa17.65■□□□□ 0.42
USP42-205ENST00000465073 CRIP2P52943 208 aaPredicted RBP17.64■□□□□ 0.41
USP42-205ENST00000465073 WNT4P56705 351 aa17.64■□□□□ 0.41
USP42-205ENST00000465073 PACRGLQ8N7B6 248 aa17.64■□□□□ 0.41
USP42-205ENST00000465073 IFI27L2Q9H2X8 130 aa17.64■□□□□ 0.41
USP42-205ENST00000465073 ISYNA1Q9NPH2 558 aa17.64■□□□□ 0.41
USP42-205ENST00000465073 PIPOXQ9P0Z9 390 aa17.64■□□□□ 0.41
USP42-205ENST00000465073 MYL12BO14950 172 aa17.63■□□□□ 0.41
USP42-205ENST00000465073 C19orf54Q5BKX5 351 aa17.63■□□□□ 0.41
USP42-205ENST00000465073 FAAP24Q9BTP7 215 aa17.63■□□□□ 0.41
USP42-205ENST00000465073 PSORS1C1Q9UIG5 152 aa17.63■□□□□ 0.41
USP42-205ENST00000465073 FOXA2Q9Y261 457 aaPredicted RBP17.63■□□□□ 0.41
USP42-205ENST00000465073 RAB29O14966 203 aa17.63■□□□□ 0.41
USP42-205ENST00000465073 FAM131AQ6UXB0 335 aa17.63■□□□□ 0.41
USP42-205ENST00000465073 TCTEX1D1Q8N7M0 179 aa17.63■□□□□ 0.41
USP42-205ENST00000465073 IL1F10Q8WWZ1 152 aa17.63■□□□□ 0.41
USP42-205ENST00000465073 DLX4Q92988 240 aaPredicted RBP17.63■□□□□ 0.41
USP42-205ENST00000465073 TOLLIPQ9H0E2 274 aa17.63■□□□□ 0.41
USP42-205ENST00000465073 A0A1W2PN81 502 aa17.62■□□□□ 0.41
USP42-205ENST00000465073 LINC01619G3V211 115 aa17.62■□□□□ 0.41
USP42-205ENST00000465073 RRHO14718 337 aa17.62■□□□□ 0.41
USP42-205ENST00000465073 SAP30O75446 220 aa17.62■□□□□ 0.41
USP42-205ENST00000465073 CHRNA7P36544 502 aa17.62■□□□□ 0.41
USP42-205ENST00000465073 RPS27AP62979 156 aaKnown RBP17.62■□□□□ 0.41
USP42-205ENST00000465073 CX3CL1P78423 397 aa17.62■□□□□ 0.41
USP42-205ENST00000465073 NDPQ00604 133 aa17.62■□□□□ 0.41
USP42-205ENST00000465073 ECSCRQ19T08 205 aa17.62■□□□□ 0.41
USP42-205ENST00000465073 C6orf201Q7Z4U5 140 aa17.62■□□□□ 0.41
USP42-205ENST00000465073 ALX4Q9H161 411 aaPredicted RBP17.62■□□□□ 0.41
USP42-205ENST00000465073 GHITMQ9H3K2 345 aa17.62■□□□□ 0.41
USP42-205ENST00000465073 FBXL15Q9H469 300 aa17.62■□□□□ 0.41
USP42-205ENST00000465073 PLCXD1Q9NUJ7 323 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms