RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 NPIPB4C9JG80 1138 aa14.02□□□□□ -0.17
LSS-205ENST00000457828 ZIC3O60481 467 aa14.02□□□□□ -0.17
LSS-205ENST00000457828 MST1LQ2TV78 715 aa14.02□□□□□ -0.17
LSS-205ENST00000457828 MRPL13Q9BYD1 178 aaKnown RBP14.02□□□□□ -0.17
LSS-205ENST00000457828 TMEM222Q9H0R3 208 aa14.02□□□□□ -0.17
LSS-205ENST00000457828 LIN7CQ9NUP9 197 aaKnown RBP14.02□□□□□ -0.17
LSS-205ENST00000457828 NUP210Q8TEM1 1887 aaPredicted RBP14.02□□□□□ -0.17
LSS-205ENST00000457828 C17orf112F2Z3M2 114 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 SPINT2O43291 252 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 SYNGR2O43760 224 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 PITX3O75364 302 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 GALR1P47211 349 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 RBM11P57052 281 aaKnown RBP14.01□□□□□ -0.17
LSS-205ENST00000457828 SLC38A11Q08AI6 406 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 PMS2P11Q13670 270 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 SPINK9Q5DT21 86 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 H2BFWTQ7Z2G1 175 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 NUFIP2Q7Z417 695 aaKnown RBP14.01□□□□□ -0.17
LSS-205ENST00000457828 MOB3AQ96BX8 217 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 UBTD1Q9HAC8 227 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 DEPPQ9NTK1 212 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 CDX1P47902 265 aaPredicted RBP14.01□□□□□ -0.17
LSS-205ENST00000457828 BAGE3Q86Y29 109 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 BAGE2Q86Y30 109 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 ZNF488Q96MN9 340 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 MMP7P09237 267 aaPredicted RBP14.01□□□□□ -0.17
LSS-205ENST00000457828 FAM27BQ5VT28 67 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 INO80CQ6PI98 192 aaPredicted RBP14.01□□□□□ -0.17
LSS-205ENST00000457828 ZNF837Q96EG3 531 aaPredicted RBP14.01□□□□□ -0.17
LSS-205ENST00000457828 C5orf52A6NGY3 159 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 NEURL1O76050 574 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 NPBWR2P48146 333 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 ACTR3CQ9C0K3 210 aaPredicted RBP14.01□□□□□ -0.17
LSS-205ENST00000457828 AURKAIP1Q9NWT8 199 aaPredicted RBP14.01□□□□□ -0.17
LSS-205ENST00000457828 FBLN5Q9UBX5 448 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 RFNGQ9Y644 331 aa14.01□□□□□ -0.17
LSS-205ENST00000457828 IGSF23A1L1A6 192 aa14□□□□□ -0.17
LSS-205ENST00000457828 PPIHO43447 177 aaKnown RBP14□□□□□ -0.17
LSS-205ENST00000457828 PTBP3O95758 552 aaKnown RBP14□□□□□ -0.17
LSS-205ENST00000457828 OPN1MWP04001 364 aa14□□□□□ -0.17
LSS-205ENST00000457828 PGA5P0DJD9 388 aa14□□□□□ -0.17
LSS-205ENST00000457828 OPN1MW2P0DN77 364 aa14□□□□□ -0.17
LSS-205ENST00000457828 OPN1MW3P0DN78 364 aa14□□□□□ -0.17
LSS-205ENST00000457828 PAX6P26367 422 aa14□□□□□ -0.17
LSS-205ENST00000457828 SUCLG1P53597 346 aaKnown RBP14□□□□□ -0.17
LSS-205ENST00000457828 TNFAIP6P98066 277 aaPredicted RBP14□□□□□ -0.17
LSS-205ENST00000457828 BSXQ3C1V8 233 aa14□□□□□ -0.17
LSS-205ENST00000457828 POC1BQ8TC44 478 aa14□□□□□ -0.17
LSS-205ENST00000457828 CXorf65A6NEN9 183 aa14□□□□□ -0.17
LSS-205ENST00000457828 A8MXE2 369 aa14□□□□□ -0.17
LSS-205ENST00000457828 GATCO43716 136 aaKnown RBP14□□□□□ -0.17
LSS-205ENST00000457828 PSG2P11465 335 aa14□□□□□ -0.17
LSS-205ENST00000457828 COX5AP20674 150 aa14□□□□□ -0.17
LSS-205ENST00000457828 QRFPP83859 136 aa14□□□□□ -0.17
LSS-205ENST00000457828 ENDOGQ14249 297 aaKnown RBP14□□□□□ -0.17
LSS-205ENST00000457828 KHDC3LQ587J8 217 aa14□□□□□ -0.17
LSS-205ENST00000457828 LHFPL1Q86WI0 220 aa14□□□□□ -0.17
LSS-205ENST00000457828 RIMS4Q9H426 269 aaPredicted RBP14□□□□□ -0.17
LSS-205ENST00000457828 SIRT7Q9NRC8 400 aa14□□□□□ -0.17
LSS-205ENST00000457828 DLL3Q9NYJ7 618 aa14□□□□□ -0.17
LSS-205ENST00000457828 CEP295Q9C0D2 2601 aa14□□□□□ -0.17
LSS-205ENST00000457828 ENSAO43768 121 aaKnown RBP14□□□□□ -0.17
LSS-205ENST00000457828 PSG4Q00888 419 aa14□□□□□ -0.17
LSS-205ENST00000457828 PNRC1Q12796 327 aaPredicted RBP14□□□□□ -0.17
LSS-205ENST00000457828 SMIM21Q3B7S5 101 aa14□□□□□ -0.17
LSS-205ENST00000457828 WDR25Q64LD2 544 aaPredicted RBP14□□□□□ -0.17
LSS-205ENST00000457828 OR10A7Q8NGE5 316 aa14□□□□□ -0.17
LSS-205ENST00000457828 TECTBQ96PL2 329 aa14□□□□□ -0.17
LSS-205ENST00000457828 GINS3Q9BRX5 216 aa14□□□□□ -0.17
LSS-205ENST00000457828 WFDC1Q9HC57 220 aa14□□□□□ -0.17
LSS-205ENST00000457828 ZNF391Q9UJN7 358 aa14□□□□□ -0.17
LSS-205ENST00000457828 ELOA3CA0A087WX78 387 aaPredicted RBP13.99□□□□□ -0.17
LSS-205ENST00000457828 TDGF1P13385 188 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 PINX1Q96BK5 328 aaKnown RBP13.99□□□□□ -0.17
LSS-205ENST00000457828 PTPN13Q12923 2485 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 WIPF3A6NGB9 483 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 EFNA2O43921 213 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 CCL20P78556 96 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 TBR1Q16650 682 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 SPTBN4Q9H254 2564 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 KIF26AQ9ULI4 1882 aaPredicted RBP13.99□□□□□ -0.17
LSS-205ENST00000457828 OR10V1Q8NGI7 309 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 TREM2Q9NZC2 230 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 SHANK1Q9Y566 2161 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 LRP5LA4QPB2 252 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 C3orf80F5H4A9 247 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 UBE2CO00762 179 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 FAM58AQ8N1B3 248 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 LYZL4Q96KX0 146 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 SMDT1Q9H4I9 107 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 TUBD1Q9UJT1 453 aa13.99□□□□□ -0.17
LSS-205ENST00000457828 ZGRF1Q86YA3 2104 aa13.98□□□□□ -0.17
LSS-205ENST00000457828 TRGC1P0CF51 173 aa13.98□□□□□ -0.17
LSS-205ENST00000457828 CEACAM6P40199 344 aa13.98□□□□□ -0.17
LSS-205ENST00000457828 RAB31Q13636 194 aa13.98□□□□□ -0.17
LSS-205ENST00000457828 FFAR4Q5NUL3 377 aa13.98□□□□□ -0.17
LSS-205ENST00000457828 FOSL1P15407 271 aa13.98□□□□□ -0.17
LSS-205ENST00000457828 PIP4P1Q86T03 277 aa13.98□□□□□ -0.17
LSS-205ENST00000457828 LRP11Q86VZ4 500 aa13.98□□□□□ -0.17
LSS-205ENST00000457828 DMRT1Q9Y5R6 373 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms