RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 LIFP15018 202 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 RPL29P47914 159 aaKnown RBP11.68□□□□□ -0.54
PTPRE-204ENST00000455661 NXPH1P58417 271 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 TLE1Q04724 770 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 OR8G2PQ6IF36 304 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 AAED1Q7RTV5 226 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 OR10V1Q8NGI7 309 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 SPSB4Q96A44 273 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 ALKBH3Q96Q83 286 aaPredicted RBP11.68□□□□□ -0.54
PTPRE-204ENST00000455661 SRXN1Q9BYN0 137 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 A0A0U1RQK1 487 aa11.67□□□□□ -0.54
PTPRE-204ENST00000455661 ZNF320A2RRD8 509 aa11.67□□□□□ -0.54
PTPRE-204ENST00000455661 DLEU1O43261 78 aa11.67□□□□□ -0.54
PTPRE-204ENST00000455661 ZIC3O60481 467 aa11.67□□□□□ -0.54
PTPRE-204ENST00000455661 CRYABP02511 175 aaKnown RBP11.67□□□□□ -0.54
PTPRE-204ENST00000455661 OR3A1P47881 315 aa11.67□□□□□ -0.54
PTPRE-204ENST00000455661 GPM6AP51674 278 aa11.67□□□□□ -0.54
PTPRE-204ENST00000455661 FAM78BQ5VT40 261 aa11.67□□□□□ -0.54
PTPRE-204ENST00000455661 BTNL3Q6UXE8 466 aa11.67□□□□□ -0.54
PTPRE-204ENST00000455661 ZNF573Q86YE8 665 aa11.67□□□□□ -0.54
PTPRE-204ENST00000455661 OR5T1Q8NG75 326 aa11.67□□□□□ -0.54
PTPRE-204ENST00000455661 OR10G9Q8NGN4 311 aa11.67□□□□□ -0.54
PTPRE-204ENST00000455661 OR10G7Q8NGN6 311 aa11.67□□□□□ -0.54
PTPRE-204ENST00000455661 PSMF1Q92530 271 aa11.67□□□□□ -0.54
PTPRE-204ENST00000455661 WFIKKN1Q96NZ8 548 aa11.67□□□□□ -0.54
PTPRE-204ENST00000455661 IL17BQ9UHF5 180 aa11.67□□□□□ -0.54
PTPRE-204ENST00000455661 IGKV1-39P01597 117 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 IGKV1D-39P04432 117 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 ZNF16P17020 682 aaPredicted RBP11.66□□□□□ -0.54
PTPRE-204ENST00000455661 CHRNA7P36544 502 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 GAGE1Q13065 139 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 SYT13Q7L8C5 426 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 OR1K1Q8NGR3 316 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 TBX15Q96SF7 602 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 TMEM208Q9BTX3 173 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 REPIN1Q9BWE0 567 aaKnown RBP11.66□□□□□ -0.54
PTPRE-204ENST00000455661 REV3LO60673 3130 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 DNPH1O43598 174 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 IGKV1-5P01602 117 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 IL3RAP26951 378 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 RAC3P60763 192 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 PPP1CBP62140 327 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 PRSS8Q16651 343 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 ATP6V1FQ16864 119 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 CEACAM16Q2WEN9 425 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 ZNF468Q5VIY5 522 aaPredicted RBP11.66□□□□□ -0.54
PTPRE-204ENST00000455661 OR56B2PQ8NGI1 322 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 HS3ST6Q96QI5 342 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 C1QTNF5Q9BXJ0 243 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 PRDM14Q9GZV8 571 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 TMEM9BQ9NQ34 198 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 LIN7CQ9NUP9 197 aaKnown RBP11.66□□□□□ -0.54
PTPRE-204ENST00000455661 RBM7Q9Y580 266 aaKnown RBP11.66□□□□□ -0.54
PTPRE-204ENST00000455661 ASXL3Q9C0F0 2248 aa11.66□□□□□ -0.54
PTPRE-204ENST00000455661 TRBV6-6A0A0A6YYG2 114 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 FAM90A26D6RGX4 464 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 TOX3O15405 576 aaPredicted RBP11.65□□□□□ -0.54
PTPRE-204ENST00000455661 PAGE4O60829 102 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 HPRT1P00492 218 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 CD99P14209 185 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 COX5AP20674 150 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 CST9LP1Q5W188 147 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 ACSM6Q6P461 480 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 LINC00596Q86U02 117 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 ZDHHC23Q8IYP9 409 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 FGFBP3Q8TAT2 258 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 GATAD1Q8WUU5 269 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 IL1F10Q8WWZ1 152 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 ZCCHC14Q8WYQ9 949 aaKnown RBP11.65□□□□□ -0.54
PTPRE-204ENST00000455661 WDYHV1Q96HA8 205 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 MTCH1Q9NZJ7 389 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 IL36RNQ9UBH0 155 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 RARRES3Q9UL19 164 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 PPP1R3CQ9UQK1 317 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 PXMP4Q9Y6I8 212 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 CLDN1O95832 211 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 CCL3P10147 92 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 RPL15P61313 204 aaKnown RBP11.65□□□□□ -0.54
PTPRE-204ENST00000455661 CEACAM21Q3KPI0 293 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 EML6Q6ZMW3 1958 aa11.65□□□□□ -0.54
PTPRE-204ENST00000455661 G3V3Y1 287 aa11.64□□□□□ -0.55
PTPRE-204ENST00000455661 HS3ST1O14792 307 aa11.64□□□□□ -0.55
PTPRE-204ENST00000455661 DEGS1O15121 323 aa11.64□□□□□ -0.55
PTPRE-204ENST00000455661 CARD18P57730 90 aa11.64□□□□□ -0.55
PTPRE-204ENST00000455661 FFAR4Q5NUL3 377 aa11.64□□□□□ -0.55
PTPRE-204ENST00000455661 TMEM14EPQ6UXP3 125 aa11.64□□□□□ -0.55
PTPRE-204ENST00000455661 C20orf204Q6ZNR8 217 aa11.64□□□□□ -0.55
PTPRE-204ENST00000455661 TMEM256Q8N2U0 113 aa11.64□□□□□ -0.55
PTPRE-204ENST00000455661 TMEM147Q9BVK8 224 aa11.64□□□□□ -0.55
PTPRE-204ENST00000455661 LILRA1O75019 489 aa11.64□□□□□ -0.55
PTPRE-204ENST00000455661 NTF4P34130 210 aa11.64□□□□□ -0.55
PTPRE-204ENST00000455661 ZNF709Q8N972 641 aa11.64□□□□□ -0.55
PTPRE-204ENST00000455661 CMTM2Q8TAZ6 248 aa11.64□□□□□ -0.55
PTPRE-204ENST00000455661 PARD6AQ9NPB6 346 aa11.64□□□□□ -0.55
PTPRE-204ENST00000455661 KCNS2Q9ULS6 477 aa11.64□□□□□ -0.55
PTPRE-204ENST00000455661 KIAA2026Q5HYC2 2103 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 ADAMTS20P59510 1910 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 C11orf94C9JXX5 98 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 IFNL4K9M1U5 179 aa11.63□□□□□ -0.55
PTPRE-204ENST00000455661 CBR3O75828 277 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms