RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 E9PI62 339 aa13.01□□□□□ -0.33
UBE2D4-209ENST00000454428 RRHO14718 337 aa13.01□□□□□ -0.33
UBE2D4-209ENST00000454428 CSTBP04080 98 aaKnown RBP13.01□□□□□ -0.33
UBE2D4-209ENST00000454428 ZP3P21754 424 aa13.01□□□□□ -0.33
UBE2D4-209ENST00000454428 CALB2P22676 271 aa13.01□□□□□ -0.33
UBE2D4-209ENST00000454428 LFNGQ8NES3 379 aa13.01□□□□□ -0.33
UBE2D4-209ENST00000454428 OR52L2PQ8NGH6 319 aa13.01□□□□□ -0.33
UBE2D4-209ENST00000454428 NEK7Q8TDX7 302 aa13.01□□□□□ -0.33
UBE2D4-209ENST00000454428 RGP1Q92546 391 aaPredicted RBP13.01□□□□□ -0.33
UBE2D4-209ENST00000454428 RDH12Q96NR8 316 aa13.01□□□□□ -0.33
UBE2D4-209ENST00000454428 SLA2Q9H6Q3 261 aa13.01□□□□□ -0.33
UBE2D4-209ENST00000454428 ISG20L2Q9H9L3 353 aaKnown RBP13.01□□□□□ -0.33
UBE2D4-209ENST00000454428 FAM53CQ9NYF3 392 aa13.01□□□□□ -0.33
UBE2D4-209ENST00000454428 TAS2R4Q9NYW5 299 aa13.01□□□□□ -0.33
UBE2D4-209ENST00000454428 TRAPPC2LQ9UL33 140 aa13.01□□□□□ -0.33
UBE2D4-209ENST00000454428 DNAH17Q9UFH2 4485 aa13□□□□□ -0.33
UBE2D4-209ENST00000454428 SAA2-SAA4A0A096LPE2 208 aa13□□□□□ -0.33
UBE2D4-209ENST00000454428 G3V2T6 193 aa13□□□□□ -0.33
UBE2D4-209ENST00000454428 TRGV3P03979 118 aa13□□□□□ -0.33
UBE2D4-209ENST00000454428 SAA2P0DJI9 122 aaPredicted RBP13□□□□□ -0.33
UBE2D4-209ENST00000454428 SERPINA2P20848 420 aa13□□□□□ -0.33
UBE2D4-209ENST00000454428 PPP1CCP36873 323 aaKnown RBP13□□□□□ -0.33
UBE2D4-209ENST00000454428 SYNJ2BPP57105 145 aa13□□□□□ -0.33
UBE2D4-209ENST00000454428 TMEM267Q0VDI3 215 aaPredicted RBP13□□□□□ -0.33
UBE2D4-209ENST00000454428 FLOT2Q14254 428 aa13□□□□□ -0.33
UBE2D4-209ENST00000454428 LCN12Q6JVE5 192 aa13□□□□□ -0.33
UBE2D4-209ENST00000454428 FAM131AQ6UXB0 335 aa13□□□□□ -0.33
UBE2D4-209ENST00000454428 Q8N402 240 aa13□□□□□ -0.33
UBE2D4-209ENST00000454428 CPNE2Q96FN4 548 aaPredicted RBP13□□□□□ -0.33
UBE2D4-209ENST00000454428 METTL9Q9H1A3 318 aa13□□□□□ -0.33
UBE2D4-209ENST00000454428 WFDC10AQ9H1F0 79 aa13□□□□□ -0.33
UBE2D4-209ENST00000454428 OR2S2Q9NQN1 319 aa13□□□□□ -0.33
UBE2D4-209ENST00000454428 SIGLEC8Q9NYZ4 499 aa13□□□□□ -0.33
UBE2D4-209ENST00000454428 ANKRD34BA5PLL1 514 aa12.99□□□□□ -0.33
UBE2D4-209ENST00000454428 MAGEB3O15480 346 aa12.99□□□□□ -0.33
UBE2D4-209ENST00000454428 C6orf183Q5T699 404 aa12.99□□□□□ -0.33
UBE2D4-209ENST00000454428 DEFB125Q8N687 156 aa12.99□□□□□ -0.33
UBE2D4-209ENST00000454428 ABHD5Q8WTS1 349 aa12.99□□□□□ -0.33
UBE2D4-209ENST00000454428 TSEN15Q8WW01 171 aaKnown RBP12.99□□□□□ -0.33
UBE2D4-209ENST00000454428 ST6GALNAC5Q9BVH7 336 aa12.99□□□□□ -0.33
UBE2D4-209ENST00000454428 JAM3Q9BX67 310 aa12.99□□□□□ -0.33
UBE2D4-209ENST00000454428 GABARAPL3Q9BY60 117 aa12.99□□□□□ -0.33
UBE2D4-209ENST00000454428 TAF9BQ9HBM6 251 aa12.99□□□□□ -0.33
UBE2D4-209ENST00000454428 DNAH11Q96DT5 4516 aa12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 TMEM212A6NML5 194 aa12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 TRBV12-3P01733 135 aa12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 CD7P09564 240 aa12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 SOX2P48431 317 aa12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 ALDH3A2P51648 485 aa12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 CD81P60033 236 aa12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 STX19Q8N4C7 294 aa12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 ACBD7Q8N6N7 88 aa12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 OR5AK2Q8NH90 309 aa12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 NEURL2Q9BR09 285 aa12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 IFI27L2Q9H2X8 130 aa12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 RAB9BQ9NP90 201 aa12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 MBNL3Q9NUK0 354 aaKnown RBP12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 ETAA1Q9NY74 926 aa12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 RNF150Q9ULK6 438 aa12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 EXOGQ9Y2C4 368 aaKnown RBP12.98□□□□□ -0.33
UBE2D4-209ENST00000454428 SC5DO75845 299 aa12.97□□□□□ -0.33
UBE2D4-209ENST00000454428 FADS2O95864 444 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-209ENST00000454428 TFAP2AP05549 437 aa12.97□□□□□ -0.33
UBE2D4-209ENST00000454428 CT45A6P0DMU7 189 aa12.97□□□□□ -0.33
UBE2D4-209ENST00000454428 CT45A5P0DMU8 189 aa12.97□□□□□ -0.33
UBE2D4-209ENST00000454428 CT45A7P0DMV0 189 aa12.97□□□□□ -0.33
UBE2D4-209ENST00000454428 EWSR1Q01844 656 aaKnown RBP eCLIP12.97□□□□□ -0.33
UBE2D4-209ENST00000454428 DYRK1AQ13627 763 aa12.97□□□□□ -0.33
UBE2D4-209ENST00000454428 ATP6AP1Q15904 470 aa12.97□□□□□ -0.33
UBE2D4-209ENST00000454428 ZNF562Q6V9R5 426 aa12.97□□□□□ -0.33
UBE2D4-209ENST00000454428 CLCC1Q96S66 551 aa12.97□□□□□ -0.33
UBE2D4-209ENST00000454428 ALG8Q9BVK2 526 aa12.97□□□□□ -0.33
UBE2D4-209ENST00000454428 JPT1Q9UK76 154 aa12.97□□□□□ -0.33
UBE2D4-209ENST00000454428 ZNF785A8K8V0 405 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 MCRIP1C9JLW8 97 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 YPEL1O60688 119 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 ZNF93P35789 620 aaPredicted RBP12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 SSBP2P81877 361 aaPredicted RBP12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 DEFA5Q01523 94 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 PLGLAQ15195 96 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 SLC22A6Q4U2R8 563 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 DDI2Q5TDH0 399 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 TRAT1Q6PIZ9 186 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 GLDNQ6ZMI3 551 aaPredicted RBP12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 LHFPL3Q86UP9 236 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 SYS1Q8N2H4 156 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 POC5Q8NA72 575 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 LGALS12Q96DT0 336 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 YPEL2Q96QA6 119 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 ENOPH1Q9UHY7 261 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 POMPQ9Y244 141 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 GMPPBQ9Y5P6 360 aa12.96□□□□□ -0.33
UBE2D4-209ENST00000454428 C13orf42A0A1B0GVH6 325 aa12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 H0YJW9 148 aa12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 DEDDO75618 318 aa12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 TPPPO94811 219 aa12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 CA2P00918 260 aa12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 GTF2F2P13984 249 aa12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 HTD2P86397 168 aa12.95□□□□□ -0.34
UBE2D4-209ENST00000454428 PMS2P11Q13670 270 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms