RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 RBP2P50120 134 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 RAB9AP51151 201 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 PRKAA2P54646 552 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 CLDN8P56748 225 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 CXCR4P61073 352 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 PCBD1P61457 104 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 RPL38P63173 70 aaKnown RBP3.52□□□□□ -1.85
SDCBP-205ENST00000447267 SPIBQ01892 262 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 TSPAN31Q12999 210 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 GAGE1Q13065 139 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 DGCR6Q14129 220 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 GK2Q14410 553 aaPredicted RBP3.52□□□□□ -1.85
SDCBP-205ENST00000447267 C2orf76Q3KRA6 126 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 OGFRL1Q5TC84 451 aaPredicted RBP3.52□□□□□ -1.85
SDCBP-205ENST00000447267 HACD4Q5VWC8 232 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 OTPQ5XKR4 325 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 WDR82Q6UXN9 313 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 PGAP1Q75T13 922 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 NR2C2APQ86WQ0 139 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 TMEM17Q86X19 198 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 PRSS35Q8N3Z0 413 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 OR4P4Q8NGL7 312 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 OR6M1Q8NGM8 313 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 OR52P1PQ8NH57 321 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 TRMT10AQ8TBZ6 339 aaKnown RBP3.52□□□□□ -1.85
SDCBP-205ENST00000447267 DEDD2Q8WXF8 326 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 RBPMSQ93062 196 aaKnown RBP3.52□□□□□ -1.85
SDCBP-205ENST00000447267 NARS2Q96I59 477 aaKnown RBP3.52□□□□□ -1.85
SDCBP-205ENST00000447267 NSL1Q96IY1 281 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 CHRDL1Q9BU40 450 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 PDCD10Q9BUL8 212 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 IFT27Q9BW83 186 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 ANKRD19PQ9H560 264 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 MTHFD2LQ9H903 347 aaPredicted RBP3.52□□□□□ -1.85
SDCBP-205ENST00000447267 EFCAB1Q9HAE3 211 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 KRT84Q9NSB2 600 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 ZNF355PQ9NSJ1 428 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 NKIRAS1Q9NYS0 192 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 ZNF222Q9UK12 451 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 PIGLQ9Y2B2 252 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 LPAP08519 4548 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 A0A087WXM4 84 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 IGHV2-26A0A0B4J1V2 119 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 NBDYA0A0U1RRE5 68 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 RPS10-NUDT3A0A1W2PQS6 291 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 A4D1N5 150 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 MPTX1A8MV57 137 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 E9PI62 339 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 G3V318 75 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 J3KTA2 159 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 BMPR1BO00238 502 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 RGS16O15492 202 aaPredicted RBP3.51□□□□□ -1.85
SDCBP-205ENST00000447267 CFLARO15519 480 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 RNF13O43567 381 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 CHP2O43745 196 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 LYPLA1O75608 230 aaPredicted RBP3.51□□□□□ -1.85
SDCBP-205ENST00000447267 LYPD3O95274 346 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 HSPB1P04792 205 aaKnown RBP3.51□□□□□ -1.85
SDCBP-205ENST00000447267 ZNF735P0CB33 412 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 FAM106CPP0CH98 169 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 VDAC1P21796 283 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 ANOS1P23352 680 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 CD1BP29016 333 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 IL12AP29459 219 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 UGT2B15P54855 530 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 FAM3BP58499 235 aaPredicted RBP3.51□□□□□ -1.85
SDCBP-205ENST00000447267 SLAQ13239 276 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 IL18R1Q13478 541 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 KRR1Q13601 381 aaKnown RBP3.51□□□□□ -1.85
SDCBP-205ENST00000447267 MED22Q15528 200 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 TRAM1Q15629 374 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 ATP6AP1Q15904 470 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 MOGAT2Q3SYC2 334 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 AKIRIN2Q53H80 203 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 ALG10BQ5I7T1 473 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 SLC35D3Q5M8T2 416 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 ENTPD8Q5MY95 495 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 OR4F3Q6IEY1 312 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 SMARCD3Q6STE5 483 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 ZBTB49Q6ZSB9 765 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 CPOQ8IVL8 374 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 ZNF679Q8IYX0 411 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 OFCC1Q8IZS5 231 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 SPAG16Q8N0X2 631 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 KRTCAP2Q8N6L1 136 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 OR5D18Q8NGL1 313 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 OR5L1Q8NGL2 311 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 OR4C15Q8NGM1 316 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 STOML3Q8TAV4 291 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 ZNF596Q8TC21 504 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 MRGPRDQ8TDS7 321 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 SPRYD4Q8WW59 207 aaPredicted RBP3.51□□□□□ -1.85
SDCBP-205ENST00000447267 APOBEC3DQ96AK3 386 aaPredicted RBP3.51□□□□□ -1.85
SDCBP-205ENST00000447267 SLCO4A1Q96BD0 722 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 CMTM5Q96DZ9 223 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 PACRGQ96M98 296 aaPredicted RBP3.51□□□□□ -1.85
SDCBP-205ENST00000447267 INTS14Q96SY0 518 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 RARRES2Q99969 163 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 HSPB9Q9BQS6 159 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 NDUFAF3Q9BU61 184 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms