RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 IL24Q13007 206 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 IHHQ14623 411 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 SLC17A1Q14916 467 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 EXOSC7Q15024 291 aaKnown RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF146Q15072 292 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 BATFQ16520 125 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 DEFB115Q30KQ5 88 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 TMEM41BQ5BJD5 291 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 GPR157Q5UAW9 335 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 SDHAF4Q5VUM1 108 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 TOMM20LQ6UXN7 152 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 Q7L0L9 218 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 TIPARPQ7Z3E1 657 aaKnown RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 NUFIP2Q7Z417 695 aaKnown RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 TRAPPC6BQ86SZ2 158 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 BIVMQ86UB2 503 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF429Q86V71 674 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 RBM45Q8IUH3 476 aaKnown RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 SGPP2Q8IWX5 399 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 CLDN19Q8N6F1 224 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 MRPL43Q8N983 215 aaKnown RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 DCAF4L2Q8NA75 395 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR4D11Q8NGI4 311 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR4D6Q8NGJ1 314 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR6K6Q8NGW6 343 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR5K2Q8NHB8 316 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF563Q8TA94 476 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 FAM213BQ8TBF2 198 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 C2orf15Q8WU43 125 aaKnown RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 TMEM239Q8WW34 195 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 CDS1Q92903 461 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 GNPNAT1Q96EK6 184 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 C18orf12Q96KH6 178 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 TNFRSF13CQ96RJ3 184 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 P2RX4Q99571 388 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 SPIN2AQ99865 258 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 SPIN2BQ9BPZ2 258 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 PDCD1LG2Q9BQ51 273 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 MIEN1Q9BRT3 115 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 GINS3Q9BRX5 216 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 DCTN5Q9BTE1 182 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 STRADBQ9C0K7 418 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 CXXC4Q9H2H0 198 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 SOHLH2Q9NX45 425 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 THYN1Q9P016 225 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 COPS7AQ9UBW8 275 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 AK3Q9UIJ7 227 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 IKZF2Q9UKS7 526 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF346Q9UL40 294 aaKnown RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 VSIG4Q9Y279 399 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 RBM7Q9Y580 266 aaKnown RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 WSB1Q9Y6I7 421 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 URGCP-MRPS24S4R325 110 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 OBSL1O75147 1896 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 A0A0J9YWU9 116 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 CXorf51AA0A1B0GTR3 108 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 MAP1LC3B2A6NCE7 125 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 MEIS3P1A6NDR6 274 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 DHRS7CA6NNS2 312 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 EPM2AB3EWF7 344 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 NTN3O00634 580 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 PITX3O75364 302 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 DEDDO75618 318 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 SLC2A10O95528 541 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 ETHE1O95571 254 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 HLA-HP01893 362 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 C1QCP02747 245 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 SCGB1A1P11684 91 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 TDGF1P13385 188 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 RPS4Y1P22090 263 aaKnown RBP3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 ACP1P24666 158 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 GNRHRP30968 328 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 SSR2P43308 183 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 GABRA2P47869 451 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 CSNK1DP48730 415 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 DNASE1L1P49184 302 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 HNRNPA3P51991 378 aaKnown RBP3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 PRPS1P60891 318 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 RPS11P62280 158 aaKnown RBP eCLIP3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 RAB11AP62491 216 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 PAFAH1B2P68402 229 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 GNMTQ14749 295 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 SHHQ15465 462 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZNF506Q5JVG8 444 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 VAX1Q5SQQ9 334 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 DCAF12Q5T6F0 453 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZNF100Q8IYN0 542 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 OR4S1Q8NGB4 309 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 OR51L1Q8NGJ5 315 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 OR51A2Q8NGJ7 313 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 OR13C9Q8NGT0 318 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 OR5H2Q8NGV7 314 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 RGP1Q92546 391 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 FRZBQ92765 325 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 RPUSD4Q96CM3 377 aaKnown RBP3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZMYND19Q96E35 227 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 ABHD14BQ96IU4 210 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 AMDHD1Q96NU7 426 aa3.58□□□□□ -1.84
HMGB1P16-201ENST00000447155 TP53RKQ96S44 253 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms