RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SDCBPO00560 298 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 BCL2L11O43521 198 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 ANGPTL7O43827 346 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 NME2P1O60361 137 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 WDR1O75083 606 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 PTBP3O95758 552 aaKnown RBP2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 IGHV3-9P01782 118 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 CRHP06850 196 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 CTSDP07339 412 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 NMBP08949 121 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 IRF2P14316 349 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 PGAM2P15259 253 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 AREGP15514 252 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 GLRA1P23415 457 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 DTYMKP23919 212 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 PSMB6P28072 239 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 NUP62P37198 522 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 RBMXP38159 391 aaKnown RBP2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 NKX2-1P43699 371 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 PPIAP62937 165 aaKnown RBP2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 CX3CL1P78423 397 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 PDZK1IP1Q13113 114 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF345Q14585 488 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 SLC9A3R2Q15599 337 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR8B8Q15620 311 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 TAF9Q16594 264 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 LRRC37A5PQ49AS3 106 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 BEX5Q5H9J7 111 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 HES3Q5TGS1 186 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 AADACL3Q5VUY0 350 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 DHRS11Q6UWP2 260 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 ALKAL2Q6UX46 152 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 CLEC18BQ6UXF7 455 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 C6orf201Q7Z4U5 140 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 DPPA2Q7Z7J5 298 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMEM219Q86XT9 240 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 SGPP2Q8IWX5 399 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 ODF3L1Q8IXM7 274 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 PDZD9Q8IXQ8 264 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 SAXO1Q8IYX7 474 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 BATF2Q8N1L9 274 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 OSR2Q8N2R0 312 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 INO80EQ8NBZ0 244 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 MDS2Q8NDY4 140 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR5M9Q8NGP3 310 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR51F2Q8NH61 342 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 LRRC20Q8TCA0 184 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 PPP1R1CQ8WVI7 109 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 MAFIPQ8WZ33 124 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 RBPMSQ93062 196 aaKnown RBP2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMEM230Q96A57 120 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 APOBEC3DQ96AK3 386 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 APH1AQ96BI3 265 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 C2orf50Q96LR7 162 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 DHRS9Q9BPW9 319 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 CMSS1Q9BQ75 279 aaKnown RBP2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF2Q9BSG1 426 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 FAAP24Q9BTP7 215 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 DEFB127Q9H1M4 99 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 C5orf66Q9H5L9 145 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 METTL8Q9H825 291 aaKnown RBP2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 RAB18Q9NP72 206 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 SLC7A10Q9NS82 523 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 NECAP2Q9NVZ3 263 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 C1orf123Q9NWV4 160 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 AK3Q9UIJ7 227 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 ANXA10Q9UJ72 324 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 KCNS2Q9ULS6 477 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 ST3GAL6Q9Y274 331 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 KCNIP3Q9Y2W7 256 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 MEMO1Q9Y316 297 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 MMP24Q9Y5R2 645 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 FER1L5A0AVI2 2057 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 EXPH5Q8NEV8 1989 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 TRBV6-7A0A0A0MS04 114 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 TRGV5A0A0B4J1U4 118 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 IGKV1-12A0A0C4DH73 117 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 PQLC2LA1A4F0 135 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 C5orf49A4QMS7 147 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 RNF222A6NCQ9 220 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 MFSD2BA6NFX1 497 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 KRBOX1C9JBD0 128 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 GEMIN2O14893 280 aaKnown RBP2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNHIT1O43257 154 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 PDCD6O75340 191 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 ADAP1O75689 374 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 CRYZL1O95825 349 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 CST4P01036 141 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 IFNA21P01568 189 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 IGKV1D-12P01611 117 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 HLA-HP01893 362 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 APOHP02749 345 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 RLN2P04090 185 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 LIPFP07098 398 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 PET100P0DJ07 73 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF728P0DKX0 622 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR5H8P0DN80 308 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 CD79AP11912 226 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 CCL2P13500 99 aa2.85□□□□□ -1.95
HMGB3P11-201ENST00000440127 TPT1P13693 172 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms