RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 OGFRL1Q5TC84 451 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 RNLSQ5VYX0 342 aa11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 ZNF880Q6PDB4 577 aa11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 AHSA2Q719I0 299 aa11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 PRR18Q8N4B5 295 aa11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 TFAP2CQ92754 450 aa11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 YPEL2Q96QA6 119 aa11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 RASL11BQ9BPW5 248 aa11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 SULT4A1Q9BR01 284 aa11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 CHCHD6Q9BRQ6 235 aa11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 ABHD14AQ9BUJ0 271 aa11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 MRPL20Q9BYC9 149 aaKnown RBP11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 IFI27L2Q9H2X8 130 aa11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 CHCHD3Q9NX63 227 aaKnown RBP11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 GHRLQ9UBU3 117 aa11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 LSM2Q9Y333 95 aaKnown RBP11.22□□□□□ -0.61
TNFRSF1A-203ENST00000437813 IGHV7-81A0A0B4J1V7 117 aa11.21□□□□□ -0.61
TNFRSF1A-203ENST00000437813 RRP9O43818 475 aaKnown RBP11.21□□□□□ -0.61
TNFRSF1A-203ENST00000437813 RAMP3O60896 148 aa11.21□□□□□ -0.61
TNFRSF1A-203ENST00000437813 NDUFA3O95167 84 aa11.21□□□□□ -0.61
TNFRSF1A-203ENST00000437813 SLC2A2P11168 524 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-203ENST00000437813 CRIP2P52943 208 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-203ENST00000437813 ACTBP60709 375 aa11.21□□□□□ -0.61
TNFRSF1A-203ENST00000437813 CD69Q07108 199 aa11.21□□□□□ -0.61
TNFRSF1A-203ENST00000437813 UNC119Q13432 240 aa11.21□□□□□ -0.61
TNFRSF1A-203ENST00000437813 C8orf59Q8N0T1 100 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-203ENST00000437813 MINDY2Q8NBR6 621 aa11.21□□□□□ -0.61
TNFRSF1A-203ENST00000437813 NPBQ8NG41 125 aa11.21□□□□□ -0.61
TNFRSF1A-203ENST00000437813 THRSPQ92748 146 aa11.21□□□□□ -0.61
TNFRSF1A-203ENST00000437813 FAM46BQ96A09 425 aa11.21□□□□□ -0.61
TNFRSF1A-203ENST00000437813 RYR3Q15413 4870 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 SAA2-SAA4A0A096LPE2 208 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 G3V318 75 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 ATP6V0E1O15342 81 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 SAA2P0DJI9 122 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 MAPK3P27361 379 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 HTR2CP28335 458 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 OR3A3P47888 321 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 RPS27AP62979 156 aaKnown RBP11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 NDPQ00604 133 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 RCN1Q15293 331 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 MMDQ15546 238 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 OR10K2Q6IF99 312 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 SVOPQ8N4V2 548 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 ZNF491Q8N8L2 437 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 OR5M8Q8NGP6 311 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 PHYHIPQ92561 330 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 UBE2E2Q96LR5 201 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 WWC2-AS2Q96NR7 200 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 TM2D1Q9BX74 207 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 ANKRD60Q9BZ19 345 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 OR51J1Q9H342 316 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 GNB4Q9HAV0 340 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 FBXO7Q9Y3I1 522 aa11.2□□□□□ -0.62
TNFRSF1A-203ENST00000437813 A0A0A6YYD4 124 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 FOXI3A8MTJ6 420 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 TMEM14DPA8MWL7 114 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 SLC22A1O15245 554 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 SOX15O60248 233 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 UBBP0CG47 229 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 VDAC1P21796 283 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 MYF6P23409 242 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 DCTN2Q13561 401 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 C5orf64Q2M2E5 130 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 ACSM3Q53FZ2 586 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 C9orf66Q5T8R8 295 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 C6orf201Q7Z4U5 140 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 GFI1Q99684 422 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 AGMATQ9BSE5 352 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 NICN1Q9BSH3 213 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 FAAP24Q9BTP7 215 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 KRTAP3-3Q9BYR6 98 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 KRTAP3-2Q9BYR7 98 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 PARP12Q9H0J9 701 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 CST11Q9H112 138 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 KCNK15Q9H427 330 aa11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 ZMAT5Q9UDW3 170 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-203ENST00000437813 TRBV6-6A0A0A6YYG2 114 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 MYL12BO14950 172 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 NBR2O15453 112 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 PROP1O75360 226 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 CDK1P06493 297 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 OR5H8P0DN80 308 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 EGR2P11161 476 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 GNB1P62873 340 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 IRF3Q14653 427 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 FAM71F2Q6NXP2 309 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 MS4A15Q8N5U1 240 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 BPIFB6Q8NFQ5 453 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 OR11H1Q8NG94 326 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 GALMQ96C23 342 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 PRR25Q96S07 402 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 TPSG1Q9NRR2 321 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 KCNIP1Q9NZI2 227 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 LRRC42Q9Y546 428 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 WSB1Q9Y6I7 421 aa11.18□□□□□ -0.62
TNFRSF1A-203ENST00000437813 SEC14L6B5MCN3 397 aa11.17□□□□□ -0.62
TNFRSF1A-203ENST00000437813 ITGB1BP1O14713 200 aa11.17□□□□□ -0.62
TNFRSF1A-203ENST00000437813 UCHL1P09936 223 aa11.17□□□□□ -0.62
TNFRSF1A-203ENST00000437813 CT45A6P0DMU7 189 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms