RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 GNG3P63215 75 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 SRPXP78539 464 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 SRSF2Q01130 221 aaKnown RBP2.3□□□□□ -2.04
LINC00407-201ENST00000426509 FLI1Q01543 452 aaPredicted RBP2.3□□□□□ -2.04
LINC00407-201ENST00000426509 EWSR1Q01844 656 aaKnown RBP eCLIP2.3□□□□□ -2.04
LINC00407-201ENST00000426509 NHLH2Q02577 135 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 PLP2Q04941 152 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 IL24Q13007 206 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 SMCO1Q147U7 214 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 KIR2DS1Q14954 304 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 SLC10A1Q14973 349 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 HMGN3Q15651 99 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 ALKBH6Q3KRA9 238 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 MIDNQ504T8 468 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 ZNF766Q5HY98 468 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 CXorf66Q5JRM2 361 aaPredicted RBP2.3□□□□□ -2.04
LINC00407-201ENST00000426509 SPATA46Q5T0L3 261 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 GPR157Q5UAW9 335 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 SHEQ5VZ18 495 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 FBXW9Q5XUX1 488 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 OR2T2Q6IF00 324 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 EIF5AL1Q6IS14 154 aaKnown RBP2.3□□□□□ -2.04
LINC00407-201ENST00000426509 FAM122CQ6P4D5 195 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 TMEM88Q6PEY1 159 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 SPSB3Q6PJ21 355 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 FBXW12Q6X9E4 464 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 MEX3BQ6ZN04 569 aaKnown RBP2.3□□□□□ -2.04
LINC00407-201ENST00000426509 ZNF818PQ6ZRF7 136 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 ZNF573Q86YE8 665 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 CBLN2Q8IUK8 224 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 MCEMP1Q8IX19 187 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 SPAG16Q8N0X2 631 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 FAM58AQ8N1B3 248 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 GAPTQ8N292 157 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 TMEM252Q8N6L7 170 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 WDR31Q8NA23 367 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 OR5T2Q8NGG2 359 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 TMEM171Q8WVE6 324 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 SECTM1Q8WVN6 248 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 RDH5Q92781 318 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 IL22RA2Q969J5 263 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 GPR146Q96CH1 333 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 C5orf30Q96GV9 206 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 BOD1Q96IK1 185 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 FER1L6-AS2Q96M78 137 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 IP6K3Q96PC2 410 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 GPHA2Q96T91 129 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 SEC11CQ9BY50 192 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 KRTAP3-1Q9BYR8 98 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 PARP12Q9H0J9 701 aaKnown RBP2.3□□□□□ -2.04
LINC00407-201ENST00000426509 DEFB127Q9H1M4 99 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 SH3BGRL3Q9H299 93 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 OR51B6Q9H340 312 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 HRH4Q9H3N8 390 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 RIMS4Q9H426 269 aaPredicted RBP2.3□□□□□ -2.04
LINC00407-201ENST00000426509 TREM1Q9NP99 234 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 ZC4H2Q9NQZ6 224 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 PARP11Q9NR21 331 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 GLRX2Q9NS18 164 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 ZFP57Q9NU63 452 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 OR1A1Q9P1Q5 309 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 Q9UFV3 132 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 CACFD1Q9UGQ2 172 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 NDRG3Q9UGV2 375 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 FBXO9Q9UK97 447 aaPredicted RBP2.3□□□□□ -2.04
LINC00407-201ENST00000426509 KCNIP3Q9Y2W7 256 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 PRELID3BQ9Y3B1 194 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 ZNF175Q9Y473 711 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 MPC1Q9Y5U8 109 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 KLF2Q9Y5W3 355 aaPredicted RBP2.3□□□□□ -2.04
LINC00407-201ENST00000426509 RFNGQ9Y644 331 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 PCNX2A6NKB5 2137 aa2.3□□□□□ -2.04
LINC00407-201ENST00000426509 MYO9AB2RTY4 2548 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 TRAV39A0A0B4J263 110 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 A0A1B0GW64 132 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 A0A1W2PR80 420 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 MEX3AA1L020 520 aaKnown RBP2.29□□□□□ -2.04
LINC00407-201ENST00000426509 LRP5LA4QPB2 252 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 COLCA2A8K830 154 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 CDRT15L2A8MXV6 281 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 IQCF6A8MYZ5 107 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 H0YL77 283 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.29□□□□□ -2.04
LINC00407-201ENST00000426509 SIRPB1O00241 398 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 SLC33A1O00400 549 aaPredicted RBP2.29□□□□□ -2.04
LINC00407-201ENST00000426509 HSPB6O14558 160 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 HS3ST1O14792 307 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 DEGS1O15121 323 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 NKX2-8O15522 239 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 MLNRO43193 412 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 TXNL1O43396 289 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 TNFSF12O43508 249 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 SSSCA1O60232 199 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 NXPH3O95157 252 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 SNAPINO95295 136 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 OR2H2O95918 312 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 IGKV1-5P01602 117 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 HEXAP06865 529 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 P0C879 139 aa2.29□□□□□ -2.04
LINC00407-201ENST00000426509 PGA5P0DJD9 388 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms