RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 OR2H1Q9GZK4 316 aa12.2□□□□□ -0.46
MSH5-206ENST00000423982 CISD1Q9NZ45 108 aaKnown RBP12.2□□□□□ -0.46
MSH5-206ENST00000423982 ZNF816-ZNF321PA0A0X1KG74 233 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 KIAA1324LA8MWY0 1029 aaPredicted RBP12.19□□□□□ -0.46
MSH5-206ENST00000423982 IFNA5P01569 189 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 SERPINA7P05543 415 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 GZMHP20718 246 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 MLF1P58340 268 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 ZNF664Q8N3J9 261 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 WFIKKN1Q96NZ8 548 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 DOCK11Q5JSL3 2073 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 KLK10O43240 276 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 NAPSAO96009 420 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 CST2P09228 141 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 Q3ZCU0 254 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 H1FOOQ8IZA3 346 aaPredicted RBP12.19□□□□□ -0.46
MSH5-206ENST00000423982 OR56B2PQ8NGI1 322 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 RNASE11Q8TAA1 199 aaKnown RBP12.19□□□□□ -0.46
MSH5-206ENST00000423982 FOXB1Q99853 325 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 HES7Q9BYE0 225 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 PLK3Q9H4B4 646 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 CDH20Q9HBT6 801 aa12.19□□□□□ -0.46
MSH5-206ENST00000423982 ZNF705GA8MUZ8 300 aaPredicted RBP12.18□□□□□ -0.46
MSH5-206ENST00000423982 B4DEV8 164 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 HS3ST1O14792 307 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 C16orf82Q7Z2V1 217 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 LILRB2Q8N423 598 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 MTCH1Q9NZJ7 389 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 CACNG5Q9UF02 275 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 LAMP3Q9UQV4 416 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 CXCL13O43927 109 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 TUSC2O75896 110 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 IGKV1-39P01597 117 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 IGKV1D-39P04432 117 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 DSCR4P56555 118 aaPredicted RBP12.18□□□□□ -0.46
MSH5-206ENST00000423982 TAS2R60P59551 318 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 USF2Q15853 346 aaPredicted RBP12.18□□□□□ -0.46
MSH5-206ENST00000423982 AAED1Q7RTV5 226 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 OR2V1Q8NHB1 315 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 GATAD1Q8WUU5 269 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 IL1F10Q8WWZ1 152 aa12.18□□□□□ -0.46
MSH5-206ENST00000423982 RPUSD4Q96CM3 377 aaKnown RBP12.18□□□□□ -0.46
MSH5-206ENST00000423982 TRBV24-1A0A075B6N3 115 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 TRAV1-1A0A0B4J248 108 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 SYNGR1O43759 233 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 IL18BPO95998 194 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 IGKV1D-33P01593 117 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 IGKV1-33P01594 117 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 F2RP25116 425 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 CCL11P51671 97 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 PCSK4Q6UW60 755 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 TGIF2LXQ8IUE1 241 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 PRR18Q8N4B5 295 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 OR10A7Q8NGE5 316 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 OR5D13Q8NGL4 314 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 RDH5Q92781 318 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 PITPNC1Q9UKF7 332 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 CD82P27701 267 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 DEFB109BQ30KR1 87 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 ABHD17BQ5VST6 288 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 TMEM183AQ8IXX5 376 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 ZNF525Q8N782 197 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 OR10G4Q8NGN3 311 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 SCGB1C1Q8TD33 95 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 HIST1H2AAQ96QV6 131 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 SMIM7Q9BQ49 75 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 ERRFI1Q9UJM3 462 aaPredicted RBP12.17□□□□□ -0.46
MSH5-206ENST00000423982 ZNF716A6NP11 495 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 H0Y980 276 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 DFFBO76075 338 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 DEFA4P12838 97 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 FOSL1P15407 271 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 ZNF16P17020 682 aaPredicted RBP12.17□□□□□ -0.46
MSH5-206ENST00000423982 FKBP2P26885 142 aaKnown RBP12.17□□□□□ -0.46
MSH5-206ENST00000423982 CD81P60033 236 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 JOSD1Q15040 202 aaPredicted RBP12.17□□□□□ -0.46
MSH5-206ENST00000423982 TESK1Q15569 626 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 KRTAP27-1Q3LI81 207 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 ATG101Q9BSB4 218 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 OR1A1Q9P1Q5 309 aa12.17□□□□□ -0.46
MSH5-206ENST00000423982 A0A096LPE4 126 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 A0A1W2PPZ6 126 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 XKRY2A2RUG3 117 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 MAP1LC3B2A6NCE7 125 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 A8MWP6 167 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 SERPINE2P07093 398 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 RFPL3SP0C7P2 107 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 MDH2P40926 338 aaKnown RBP12.16□□□□□ -0.46
MSH5-206ENST00000423982 RPS16P62249 146 aaKnown RBP12.16□□□□□ -0.46
MSH5-206ENST00000423982 RAC1P63000 192 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 PNRC1Q12796 327 aaPredicted RBP12.16□□□□□ -0.46
MSH5-206ENST00000423982 PRDX4Q13162 271 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 OR1P1Q8NH06 330 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 ABHD3Q8WU67 409 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 ZNF845Q96IR2 970 aaPredicted RBP12.16□□□□□ -0.46
MSH5-206ENST00000423982 ABHD14BQ96IU4 210 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 MAP1LC3BQ9GZQ8 125 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 TMEM242Q9NWH2 141 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 TPRP12270 2363 aaKnown RBP12.16□□□□□ -0.46
MSH5-206ENST00000423982 BSNQ9UPA5 3926 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms