RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 SRXN1Q9BYN0 137 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 OR11A1Q9GZK7 315 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 LAT2Q9GZY6 243 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 C20orf85Q9H1P6 137 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 PRO1933Q9H354 126 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 AAMDCQ9H7C9 122 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 PLEKHA1Q9HB21 404 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF226Q9NYT6 803 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 DOK5Q9P104 306 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 CLCF1Q9UBD9 225 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 TESQ9UGI8 421 aaKnown RBP3.85□□□□□ -1.79
SF3B1-202ENST00000409915 CACFD1Q9UGQ2 172 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 FZR1Q9UM11 496 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 SLC7A11Q9UPY5 501 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 ANGPT4Q9Y264 503 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 POLDIP2Q9Y2S7 368 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 TNFRSF18Q9Y5U5 241 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 PCNX1Q96RV3 2341 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 CRYBG3Q68DQ2 2970 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 NCOA6Q14686 2063 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 IGHV3-15A0A0B4J1V0 119 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 A0A1B0GW15 77 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 SLC22A20A6NK97 555 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF726A6NNF4 738 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 CYSRT1A8MQ03 144 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 A8MVM7 634 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 FAM220BPB1ANY3 271 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 EEF1E1-BLOC1S5C9J1V9 151 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 WNT9BO14905 357 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 RAB29O14966 203 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 PPP1R2P9O14990 202 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 MPPED1O15442 326 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 EEF1E1O43324 174 aaKnown RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 BCL2L11O43521 198 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 TCF21O43680 179 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 SSNA1O43805 119 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 CXCL13O43927 109 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 GCM2O75603 506 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 YIF1AO95070 293 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 VAMP5O95183 116 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 CYB5R3P00387 301 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 PMP2P02689 132 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 DBIP07108 87 aaKnown RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 SLC25A4P12235 298 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 GP1BBP13224 206 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 PGCP20142 388 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 TNFRSF1BP20333 461 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 NFYBP25208 207 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 CHRNB4P30926 498 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 NPBWR2P48146 333 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 IDH2P48735 452 aaKnown RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF136P52737 540 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 EFNB2P52799 333 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 ART1P52961 327 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 CRYBA2P53672 197 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 OR10A3P58181 314 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 SNRPGP62308 76 aaKnown RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 LCN2P80188 198 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 KLF9Q13886 244 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 KIAA0141Q14154 515 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 GUK1Q16774 197 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 ODF4Q2M2E3 257 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 TMEM176BQ3YBM2 270 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 SLC25A30Q5SVS4 291 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 AKR1C8PQ5T2L2 129 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 C9orf135Q5VTT2 229 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 OLFML2AQ68BL7 652 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF626Q68DY1 528 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF57Q68EA5 555 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 HBMQ6B0K9 141 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 DMKNQ6E0U4 476 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 OR2T5Q6IEZ7 315 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 DEF8Q6ZN54 512 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 LCNL1Q6ZST4 164 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 SSX7Q7RTT5 188 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 NUFIP2Q7Z417 695 aaKnown RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 COX8CQ7Z4L0 72 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 CATSPERDQ86XM0 798 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 SLC30A8Q8IWU4 369 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 H1FOOQ8IZA3 346 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 BPIFB2Q8N4F0 458 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 TEX45Q8NA69 505 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 CYB561A3Q8NBI2 242 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 RELL2Q8NC24 303 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 SLC30A7Q8NEW0 376 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 GPR32P1Q8NGA4 272 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 OR1S2Q8NGQ3 325 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 OR2T29Q8NH02 315 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 OR10D3Q8NH80 312 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 ZPLD1Q8TCW7 415 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 RGP1Q92546 391 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 PYURFQ96I23 114 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 PHB2Q99623 299 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 C20orf144Q9BQM9 153 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 ADAT1Q9BUB4 502 aaKnown RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 MCRIP2Q9BUT9 160 aaKnown RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 TMEM38AQ9H6F2 299 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF430Q9H8G1 570 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-202ENST00000409915 TMEM27Q9HBJ8 222 aa3.84□□□□□ -1.79
SF3B1-202ENST00000409915 BCL2L10Q9HD36 194 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms