RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 SRSF7Q16629 238 aaKnown RBP eCLIP15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 PNLIPRP3Q17RR3 467 aa15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 ZNF260Q3ZCT1 412 aa15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 OR2AK2Q8NG84 335 aa15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 ABHD14AQ9BUJ0 271 aa15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 DCSTAMPQ9H295 470 aa15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 DIABLOQ9NR28 239 aa15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 ELF5Q9UKW6 265 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 MMP24Q9Y5R2 645 aa15.94■□□□□ 0.14
PDLIM2-207ENST00000409417 A0A1B0GUS0 222 aa15.93■□□□□ 0.14
PDLIM2-207ENST00000409417 TMEM235A6NFC5 223 aa15.93■□□□□ 0.14
PDLIM2-207ENST00000409417 TIMM23O14925 209 aa15.93■□□□□ 0.14
PDLIM2-207ENST00000409417 ZBTB25P24278 435 aa15.93■□□□□ 0.14
PDLIM2-207ENST00000409417 CD24P25063 80 aa15.93■□□□□ 0.14
PDLIM2-207ENST00000409417 UBE2NLQ5JXB2 153 aa15.93■□□□□ 0.14
PDLIM2-207ENST00000409417 Q6ZS49 121 aa15.93■□□□□ 0.14
PDLIM2-207ENST00000409417 TMEM219Q86XT9 240 aa15.93■□□□□ 0.14
PDLIM2-207ENST00000409417 SAMD12Q8N8I0 201 aa15.93■□□□□ 0.14
PDLIM2-207ENST00000409417 OR4A4PQ8NGN8 299 aa15.93■□□□□ 0.14
PDLIM2-207ENST00000409417 BEX1Q9HBH7 125 aa15.93■□□□□ 0.14
PDLIM2-207ENST00000409417 SLC23A1Q9UHI7 598 aa15.93■□□□□ 0.14
PDLIM2-207ENST00000409417 ZNF230Q9UIE0 474 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-207ENST00000409417 SCOCQ9UIL1 159 aa15.93■□□□□ 0.14
PDLIM2-207ENST00000409417 TRAV18A0A075B6X5 111 aa15.92■□□□□ 0.14
PDLIM2-207ENST00000409417 IGKV1-6A0A0C4DH72 117 aa15.92■□□□□ 0.14
PDLIM2-207ENST00000409417 FABP7O15540 132 aa15.92■□□□□ 0.14
PDLIM2-207ENST00000409417 HSPA12AO43301 675 aa15.92■□□□□ 0.14
PDLIM2-207ENST00000409417 TSPAN9O75954 239 aa15.92■□□□□ 0.14
PDLIM2-207ENST00000409417 DIRAS3O95661 229 aa15.92■□□□□ 0.14
PDLIM2-207ENST00000409417 CEACAM6P40199 344 aa15.92■□□□□ 0.14
PDLIM2-207ENST00000409417 Q6ZSV7 163 aa15.92■□□□□ 0.14
PDLIM2-207ENST00000409417 THNSL2Q86YJ6 484 aa15.92■□□□□ 0.14
PDLIM2-207ENST00000409417 CLVS1Q8IUQ0 354 aaPredicted RBP15.92■□□□□ 0.14
PDLIM2-207ENST00000409417 DRAM1Q8N682 238 aa15.92■□□□□ 0.14
PDLIM2-207ENST00000409417 RAB2BQ8WUD1 216 aa15.92■□□□□ 0.14
PDLIM2-207ENST00000409417 ACOT12Q8WYK0 555 aa15.92■□□□□ 0.14
PDLIM2-207ENST00000409417 S100A16Q96FQ6 103 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-207ENST00000409417 NPFFR1Q9GZQ6 430 aa15.92■□□□□ 0.14
PDLIM2-207ENST00000409417 IGHV1-3A0A0C4DH29 117 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 FAM90A9PA6NNJ1 464 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 FAM106CPP0CH98 169 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 MDKP21741 143 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 REG1BP48304 166 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 TMBIM6P55061 237 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 GNG2P59768 71 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 HABP2Q14520 560 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 LYG1Q8N1E2 194 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 OR56B4Q8NH76 319 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 RTN4IP1Q8WWV3 396 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 CFHR4Q92496 578 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 BCL7BQ9BQE9 202 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 C16orf95Q9H693 158 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 OR1A1Q9P1Q5 309 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 ITGB1BP1O14713 200 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 TXNL1O43396 289 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 XRCC3O43542 346 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 LANCL1O43813 399 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 HERPUD1Q15011 391 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 C3orf56Q8N813 242 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 OR4C13Q8NGP0 309 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 LINC01006Q8NI28 216 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 NUDCD2Q8WVJ2 157 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 CAPSLQ8WWF8 208 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 MAFIPQ8WZ33 124 aa15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 RANBP3Q9H6Z4 567 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-207ENST00000409417 CLPSL1A2RUU4 121 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 LPLP06858 475 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 GSTT2P0CG29 244 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 GSTT2BP0CG30 244 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 IGSF11Q5DX21 431 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 C16orf82Q7Z2V1 217 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 MOB3BQ86TA1 216 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 TGIF2LXQ8IUE1 241 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 ODF3L1Q8IXM7 274 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 IZUMO1Q8IYV9 350 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 EDARADDQ8WWZ3 215 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 AP3S1Q92572 193 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 CMTM3Q96MX0 182 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 AGMATQ9BSE5 352 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 CABLES2Q9BTV7 478 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 ST6GALNAC5Q9BVH7 336 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 PARP12Q9H0J9 701 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 IFI27L2Q9H2X8 130 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 AUNIPQ9H7T9 357 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 COMMD3Q9UBI1 195 aa15.9■□□□□ 0.14
PDLIM2-207ENST00000409417 SSX5O60225 188 aa15.89■□□□□ 0.13
PDLIM2-207ENST00000409417 ZNF182P17025 639 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-207ENST00000409417 DTX3Q8N9I9 347 aa15.89■□□□□ 0.13
PDLIM2-207ENST00000409417 AKR1E2Q96JD6 320 aa15.89■□□□□ 0.13
PDLIM2-207ENST00000409417 RBM14Q96PK6 669 aaKnown RBP15.89■□□□□ 0.13
PDLIM2-207ENST00000409417 TOLLIPQ9H0E2 274 aa15.89■□□□□ 0.13
PDLIM2-207ENST00000409417 C11orf54Q9H0W9 315 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-207ENST00000409417 GHITMQ9H3K2 345 aa15.89■□□□□ 0.13
PDLIM2-207ENST00000409417 IGKV1D-8A0A087WSZ0 117 aa15.88■□□□□ 0.13
PDLIM2-207ENST00000409417 TRBV6-7A0A0A0MS04 114 aa15.88■□□□□ 0.13
PDLIM2-207ENST00000409417 BET1O15155 118 aa15.88■□□□□ 0.13
PDLIM2-207ENST00000409417 ST8SIA5O15466 376 aa15.88■□□□□ 0.13
PDLIM2-207ENST00000409417 OR2F2O95006 317 aa15.88■□□□□ 0.13
PDLIM2-207ENST00000409417 APOA1P02647 267 aa15.88■□□□□ 0.13
PDLIM2-207ENST00000409417 SNRNP70P08621 437 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms