RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 RPS5P46782 204 aaKnown RBP-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 SERPINB10P48595 397 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 HSPA13P48723 471 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 GABARAPL2P60520 117 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 C1QTNF8P60827 252 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 HBG1P69891 147 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 HBG2P69892 147 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 LCN2P80188 198 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 RUNX1Q01196 453 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 DYNC1I2Q13409 638 aaKnown RBP-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 PDK2Q15119 407 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 ELOBQ15370 118 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 GUSBP1Q15486 140 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 TAL2Q16559 108 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 ATP6V1FQ16864 119 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 HNRNPA1L2Q32P51 320 aaKnown RBP-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 ARHGAP11BQ3KRB8 267 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 DCXRQ7Z4W1 244 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 ATPAF2Q8N5M1 289 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 C9orf163Q8N9P6 203 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 CLHC1Q8NHS4 586 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 DOK4Q8TEW6 326 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 OBSCN-AS1Q96MR7 158 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 PRSS27Q9BQR3 290 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 MIEN1Q9BRT3 115 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 EBPLQ9BY08 206 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 CHRNA10Q9GZZ6 450 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 AUNIPQ9H7T9 357 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 ACOT13Q9NPJ3 140 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 DIABLOQ9NR28 239 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 SNX12Q9UMY4 172 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 NSD2O96028 1365 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 ALPK3Q96L96 1907 aa-0.36□□□□□ -2.47
MIR548I3-201ENST00000408378 TPRP12270 2363 aaKnown RBP-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 LRP1Q07954 4544 aaKnown RBP-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 TRBV6-7A0A0A0MS04 114 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 TRAV25A0A0B4J276 109 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 ANKRD20A5PA0PJZ0 165 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 FAM183AA6NL82 134 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 OR11H12B2RN74 326 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 B4DEV8 164 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 I3L4J1 428 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 PSMD11O00231 422 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 EPPINO95925 133 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 BPGMP07738 259 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 PSMA1P25786 263 aaKnown RBP-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 CRYBB3P26998 211 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 TSPOP30536 169 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 CCR2P41597 374 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 FAM3AP98173 230 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 BAXQ07812 192 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 PLPPR5Q32ZL2 321 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 NDUFAF6Q330K2 333 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 HENMT1Q5T8I9 393 aaKnown RBP-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 DRAM2Q6UX65 266 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 KTN1-AS1Q86SY8 53 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 ZBTB8OSQ8IWT0 167 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 MICU2Q8IYU8 434 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 YIPF7Q8N8F6 280 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 CNEP1R1Q8N9A8 125 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 PROKR2Q8NFJ6 384 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 OR11H2Q8NH07 326 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 SMCR5Q8TEV8 140 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 TSKUQ8WUA8 353 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 NELFBQ8WX92 580 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 HBEGFQ99075 208 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 VAT1Q99536 393 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 BPIFA3Q9BQP9 254 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 ACBD6Q9BR61 282 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 C11orf70Q9BRQ4 267 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 TRABDQ9H4I3 376 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 MRPL22Q9NWU5 206 aaKnown RBP-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 ZFP30Q9Y2G7 519 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 UNC79Q9P2D8 2635 aa-0.37□□□□□ -2.47
MIR548I3-201ENST00000408378 ABCB11O95342 1321 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 HIVEP3Q5T1R4 2406 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 LOC110117498A0A087WWA1 95 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 TRAV8-2A0A0B4J237 113 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 IGHV1-18A0A0C4DH31 117 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 NCF1BA6NI72 391 aaPredicted RBP-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 HMSDA8MTL9 139 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 NCF1CA8MVU1 366 aaPredicted RBP-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 BOLA2-SMG1P6H3BVE0 249 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 BHLHE40O14503 412 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 CPLX1O14810 134 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 COCHO43405 550 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 IGKV5-2P06315 115 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 OR8G3PP0DMU2 310 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 RNASE3P12724 160 aaKnown RBP-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 SPNP16150 400 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 IFNGR2P38484 337 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 CCT6AP40227 531 aaKnown RBP-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 PSMD4P55036 377 aaKnown RBP-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 AQP4P55087 323 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 RAB38P57729 211 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 SPINK7P58062 85 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 FGF12P61328 243 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 PRDX1Q06830 199 aaKnown RBP-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 C10orf55Q5SWW7 151 aa-0.38□□□□□ -2.47
MIR548I3-201ENST00000408378 TEX36Q5VZQ5 186 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms