RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TMED1Q13445 227 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 DYRK1AQ13627 763 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ACTBL2Q562R1 376 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ATAD3CQ5T2N8 411 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 STEAP3Q658P3 488 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 UNQ5815/PRO19632Q6UWF5 114 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 FAM131AQ6UXB0 335 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 KCTD20Q7Z5Y7 419 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 DDB2Q92466 427 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 TMEM106AQ96A25 262 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 GPER1Q99527 375 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 GABARAPL1Q9H0R8 117 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 RIBC2Q9H4K1 309 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 CHCHD3Q9NX63 227 aaKnown RBP8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 SAA2-SAA4A0A096LPE2 208 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 DAPL1A0PJW8 107 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 SHISA3A0PJX4 238 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 H0Y980 276 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ARPC1BO15143 372 aaKnown RBP8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 TRGV3P03979 118 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 SAA2P0DJI9 122 aaPredicted RBP8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 CT45A6P0DMU7 189 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 CT45A5P0DMU8 189 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 CT45A7P0DMV0 189 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 RAB3AP20336 220 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 EDN2P20800 178 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 SERPINA2P20848 420 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 SOX2P48431 317 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ALDH3A2P51648 485 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 AKIRIN2Q53H80 203 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 GLDNQ6ZMI3 551 aaPredicted RBP8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 LHFPL3Q86UP9 236 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 TCTEX1D1Q8N7M0 179 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 OR8J1Q8NGP2 316 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 CLCC1Q96S66 551 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ABHD14AQ9BUJ0 271 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 PARP12Q9H0J9 701 aaKnown RBP8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 CST11Q9H112 138 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 IFI27L2Q9H2X8 130 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 TAF9BQ9HBM6 251 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 OR2S2Q9NQN1 319 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 TRAPPC2LQ9UL33 140 aa8.97□□□□□ -0.97
SPTLC1P3-201ENST00000403408 SPINT2O43291 252 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 CALB2P22676 271 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 GTF2A1P52655 376 aaPredicted RBP8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 LINC00205P59089 165 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 PMS2P11Q13670 270 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 MPV17LQ2QL34 196 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 RPL39P5Q59GN2 51 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 XAF1Q6GPH4 301 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 SIGIRRQ6IA17 410 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 NEK7Q8TDX7 302 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 LGALS12Q96DT0 336 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 OVOL2Q9BRP0 275 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 ST6GALNAC5Q9BVH7 336 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 JAM3Q9BX67 310 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 GABARAPL3Q9BY60 117 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 METTL9Q9H1A3 318 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 RANGRFQ9HD47 186 aaPredicted RBP8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 MBNL3Q9NUK0 354 aaKnown RBP8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 ETAA1Q9NY74 926 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 DHDHQ9UQ10 334 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 EXOGQ9Y2C4 368 aaKnown RBP8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 HSPG2P98160 4391 aa8.96□□□□□ -0.98
SPTLC1P3-201ENST00000403408 G3V2T6 193 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 SLC25A17O43808 307 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 PROP1O75360 226 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 FADS2O95864 444 aaKnown RBP8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 CA2P00918 260 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 ZP3P21754 424 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 CD81P60033 236 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 FLOT2Q14254 428 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 ATP6AP1Q15904 470 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 SLC22A6Q4U2R8 563 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 PYHIN1Q6K0P9 492 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 AMIGO2Q86SJ2 522 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 GTSCR1Q86UQ5 136 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 Q8N402 240 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 ACBD7Q8N6N7 88 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 OR5T1Q8NG75 326 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 OR5AK2Q8NH90 309 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 ABHD5Q8WTS1 349 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 TSEN15Q8WW01 171 aaKnown RBP8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 NEURL2Q9BR09 285 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 ALG8Q9BVK2 526 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 MED4Q9NPJ6 270 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 SIGLEC8Q9NYZ4 499 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 POMPQ9Y244 141 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 ERGIC3Q9Y282 383 aa8.95□□□□□ -0.98
SPTLC1P3-201ENST00000403408 TMEM212A6NML5 194 aa8.94□□□□□ -0.98
SPTLC1P3-201ENST00000403408 H0YJW9 148 aa8.94□□□□□ -0.98
SPTLC1P3-201ENST00000403408 ST8SIA5O15466 376 aa8.94□□□□□ -0.98
SPTLC1P3-201ENST00000403408 SC5DO75845 299 aa8.94□□□□□ -0.98
SPTLC1P3-201ENST00000403408 PRR20EP86478 221 aa8.94□□□□□ -0.98
SPTLC1P3-201ENST00000403408 PRR20CP86479 221 aa8.94□□□□□ -0.98
SPTLC1P3-201ENST00000403408 PRR20DP86480 221 aa8.94□□□□□ -0.98
SPTLC1P3-201ENST00000403408 PRR20BP86481 221 aa8.94□□□□□ -0.98
SPTLC1P3-201ENST00000403408 PRR20AP86496 221 aa8.94□□□□□ -0.98
SPTLC1P3-201ENST00000403408 PSG5Q15238 335 aa8.94□□□□□ -0.98
SPTLC1P3-201ENST00000403408 TMEM30BQ3MIR4 351 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms