RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 NMSQ5H8A3 153 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 KIAA2026Q5HYC2 2103 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 ALKBH2Q6NS38 261 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 Q6ZT83 130 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 H1FOOQ8IZA3 346 aaPredicted RBP20.1■□□□□ 0.81
PABPN1-202ENST00000397276 PBDC1Q9BVG4 233 aa20.1■□□□□ 0.81
PABPN1-202ENST00000397276 K7N7A8 449 aa20.09■□□□□ 0.81
PABPN1-202ENST00000397276 GATCO43716 136 aaKnown RBP20.09■□□□□ 0.81
PABPN1-202ENST00000397276 OR8G1Q15617 311 aa20.09■□□□□ 0.81
PABPN1-202ENST00000397276 KLF14Q8TD94 323 aaPredicted RBP20.09■□□□□ 0.81
PABPN1-202ENST00000397276 Q8WTZ3 238 aa20.09■□□□□ 0.81
PABPN1-202ENST00000397276 GTF3AQ92664 365 aaKnown RBP20.09■□□□□ 0.81
PABPN1-202ENST00000397276 RAB39BQ96DA2 213 aa20.09■□□□□ 0.81
PABPN1-202ENST00000397276 H3BQ15 152 aa20.09■□□□□ 0.81
PABPN1-202ENST00000397276 CHST1O43916 411 aa20.09■□□□□ 0.81
PABPN1-202ENST00000397276 ZNF674Q2M3X9 581 aa20.09■□□□□ 0.81
PABPN1-202ENST00000397276 H3BP45 60 aa20.08■□□□□ 0.81
PABPN1-202ENST00000397276 WNT9BO14905 357 aa20.08■□□□□ 0.81
PABPN1-202ENST00000397276 IGHG3P01860 377 aa20.08■□□□□ 0.81
PABPN1-202ENST00000397276 SERPINE2P07093 398 aa20.08■□□□□ 0.81
PABPN1-202ENST00000397276 KIR2DL2P43627 348 aaPredicted RBP20.08■□□□□ 0.81
PABPN1-202ENST00000397276 ZNF880Q6PDB4 577 aa20.08■□□□□ 0.81
PABPN1-202ENST00000397276 TMEM252Q8N6L7 170 aa20.08■□□□□ 0.81
PABPN1-202ENST00000397276 OR10V1Q8NGI7 309 aa20.08■□□□□ 0.81
PABPN1-202ENST00000397276 RNASE11Q8TAA1 199 aaKnown RBP20.08■□□□□ 0.81
PABPN1-202ENST00000397276 TMEM171Q8WVE6 324 aa20.08■□□□□ 0.81
PABPN1-202ENST00000397276 KCNS2Q9ULS6 477 aa20.08■□□□□ 0.81
PABPN1-202ENST00000397276 POLDIP2Q9Y2S7 368 aa20.08■□□□□ 0.81
PABPN1-202ENST00000397276 WRBO00258 174 aa20.08■□□□□ 0.8
PABPN1-202ENST00000397276 CDX1P47902 265 aaPredicted RBP20.08■□□□□ 0.8
PABPN1-202ENST00000397276 ERVFRD-1P60508 538 aa20.08■□□□□ 0.8
PABPN1-202ENST00000397276 C1QL4Q86Z23 238 aa20.08■□□□□ 0.8
PABPN1-202ENST00000397276 OR5C1Q8NGR4 320 aa20.08■□□□□ 0.8
PABPN1-202ENST00000397276 C11orf1Q9H5F2 150 aa20.08■□□□□ 0.8
PABPN1-202ENST00000397276 TGIF2-C20orf24A0A0A6YYL0 155 aa20.07■□□□□ 0.8
PABPN1-202ENST00000397276 H0Y980 276 aa20.07■□□□□ 0.8
PABPN1-202ENST00000397276 HOXC12P31275 282 aa20.07■□□□□ 0.8
PABPN1-202ENST00000397276 OR5D13Q8NGL4 314 aa20.07■□□□□ 0.8
PABPN1-202ENST00000397276 OR10D4PQ8NGN7 298 aa20.07■□□□□ 0.8
PABPN1-202ENST00000397276 GLRX2Q9NS18 164 aa20.07■□□□□ 0.8
PABPN1-202ENST00000397276 TRBV6-6A0A0A6YYG2 114 aa20.07■□□□□ 0.8
PABPN1-202ENST00000397276 GALR2O43603 387 aaPredicted RBP20.07■□□□□ 0.8
PABPN1-202ENST00000397276 RAC2P15153 192 aa20.07■□□□□ 0.8
PABPN1-202ENST00000397276 CD82P27701 267 aa20.07■□□□□ 0.8
PABPN1-202ENST00000397276 TAGLN2P37802 199 aaKnown RBP20.07■□□□□ 0.8
PABPN1-202ENST00000397276 ERVK11-1P61568 191 aa20.07■□□□□ 0.8
PABPN1-202ENST00000397276 GTF3C1Q12789 2109 aa20.07■□□□□ 0.8
PABPN1-202ENST00000397276 OR2G3Q8NGZ4 309 aa20.07■□□□□ 0.8
PABPN1-202ENST00000397276 PLEKHF2Q9H8W4 249 aa20.07■□□□□ 0.8
PABPN1-202ENST00000397276 WDR1O75083 606 aa20.06■□□□□ 0.8
PABPN1-202ENST00000397276 S100GP29377 79 aa20.06■□□□□ 0.8
PABPN1-202ENST00000397276 MAS1LP35410 378 aa20.06■□□□□ 0.8
PABPN1-202ENST00000397276 FABP6P51161 128 aa20.06■□□□□ 0.8
PABPN1-202ENST00000397276 SPSB3Q6PJ21 355 aa20.06■□□□□ 0.8
PABPN1-202ENST00000397276 UFSP2Q9NUQ7 469 aa20.06■□□□□ 0.8
PABPN1-202ENST00000397276 TAAR3PQ9P1P4 343 aa20.06■□□□□ 0.8
PABPN1-202ENST00000397276 STRAPQ9Y3F4 350 aaKnown RBP20.06■□□□□ 0.8
PABPN1-202ENST00000397276 RBFOX3A6NFN3 312 aa20.06■□□□□ 0.8
PABPN1-202ENST00000397276 PGA5P0DJD9 388 aa20.06■□□□□ 0.8
PABPN1-202ENST00000397276 ELOBQ15370 118 aa20.06■□□□□ 0.8
PABPN1-202ENST00000397276 ZNF497Q6ZNH5 498 aa20.06■□□□□ 0.8
PABPN1-202ENST00000397276 LYRM2Q9NU23 88 aaPredicted RBP20.06■□□□□ 0.8
PABPN1-202ENST00000397276 TREM2Q9NZC2 230 aa20.06■□□□□ 0.8
PABPN1-202ENST00000397276 ATP6V0CP27449 155 aa20.06■□□□□ 0.8
PABPN1-202ENST00000397276 TESK1Q15569 626 aa20.06■□□□□ 0.8
PABPN1-202ENST00000397276 FAM53AQ6NSI3 398 aaPredicted RBP20.06■□□□□ 0.8
PABPN1-202ENST00000397276 INO80CQ6PI98 192 aaPredicted RBP20.06■□□□□ 0.8
PABPN1-202ENST00000397276 GPR146Q96CH1 333 aa20.06■□□□□ 0.8
PABPN1-202ENST00000397276 GAR1Q9NY12 217 aaKnown RBP20.06■□□□□ 0.8
PABPN1-202ENST00000397276 SH2D1BO14796 132 aa20.05■□□□□ 0.8
PABPN1-202ENST00000397276 CEACAM6P40199 344 aa20.05■□□□□ 0.8
PABPN1-202ENST00000397276 DYNLT3P51808 116 aa20.05■□□□□ 0.8
PABPN1-202ENST00000397276 ID3Q02535 119 aa20.05■□□□□ 0.8
PABPN1-202ENST00000397276 ODF3L1Q8IXM7 274 aa20.05■□□□□ 0.8
PABPN1-202ENST00000397276 CABLES2Q9BTV7 478 aa20.05■□□□□ 0.8
PABPN1-202ENST00000397276 GPR61Q9BZJ8 451 aa20.05■□□□□ 0.8
PABPN1-202ENST00000397276 MLNRO43193 412 aa20.05■□□□□ 0.8
PABPN1-202ENST00000397276 PSPNO60542 156 aa20.05■□□□□ 0.8
PABPN1-202ENST00000397276 CNOT4O95628 575 aaKnown RBP20.05■□□□□ 0.8
PABPN1-202ENST00000397276 IGLV2-14P01704 120 aa20.05■□□□□ 0.8
PABPN1-202ENST00000397276 MSL2Q9HCI7 577 aa20.05■□□□□ 0.8
PABPN1-202ENST00000397276 TRAV17A0A0B4J275 112 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 S100A2P29034 98 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 UBE2KP61086 200 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 DLK1P80370 383 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 UNQ6494/PRO21346Q6UXR6 183 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 Q6ZRM9 215 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 MGAQ8IWI9 3026 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 CXorf65A6NEN9 183 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 IQCF6A8MYZ5 107 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 HIST1H2BKO60814 126 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 HIST1H2BJP06899 126 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 SOD3P08294 240 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 HIST1H2BOP23527 126 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 HIST1H2BBP33778 126 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 HIST1H2BDP58876 126 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 HIST1H2BCP62807 126 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 HIST2H2BEQ16778 126 aa20.04■□□□□ 0.8
PABPN1-202ENST00000397276 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.04■□□□□ 0.8
PABPN1-202ENST00000397276 PRAMEF6Q5VXH4 476 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms