RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 MUC21A0A0G2JKD1 596 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 MUC21A0A140T8X8 626 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 UBE2L5PA0A1B0GUS4 154 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 BCAT2O15382 392 aaPredicted RBP7.33□□□□□ -1.24
NDE1-202ENST00000396355 EML2O95834 649 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 PPIAL4GP0DN37 164 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 CPMP14384 443 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 CNN3Q15417 329 aaKnown RBP7.33□□□□□ -1.24
NDE1-202ENST00000396355 MUC21Q5SSG8 566 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 SLC25A34Q6PIV7 304 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 LHFPL2Q6ZUX7 228 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 VASH2Q86V25 355 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 BLNKQ8WV28 456 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 B5MCH6 92 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 FABP2P12104 132 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 CSRP1P21291 193 aaKnown RBP7.33□□□□□ -1.24
NDE1-202ENST00000396355 PCK2Q16822 640 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 SLC48A1Q6P1K1 146 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 MTURNQ8N3F0 131 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 FER1L6-AS1Q8NA97 138 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 OR8B3Q8NGG8 313 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 TIMP4Q99727 224 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 IGHV2OR16-5A0A0B4J2B6 119 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 A0A1B0GTI1 187 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 C7orf71A4D174 169 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 SOCS1O15524 211 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 CER1O95813 267 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 RPS21P63220 83 aaKnown RBP7.32□□□□□ -1.24
NDE1-202ENST00000396355 HLA-BQ31612 363 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 SLC22A24Q8N4F4 322 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 NINJ1Q92982 152 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 PLEKHF2Q9H8W4 249 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 MBNL3Q9NUK0 354 aaKnown RBP7.32□□□□□ -1.24
NDE1-202ENST00000396355 MTCH1Q9NZJ7 389 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 SIGLEC7Q9Y286 467 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 F5H5K5 113 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 GAPDHP04406 335 aaKnown RBP7.32□□□□□ -1.24
NDE1-202ENST00000396355 CEACAM5P06731 702 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 TSPOP30536 169 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 CISD2Q8N5K1 135 aaKnown RBP7.32□□□□□ -1.24
NDE1-202ENST00000396355 TMEM170AQ8WVE7 144 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 DNASE2BQ8WZ79 361 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 PIGTQ969N2 578 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 BOD1Q96IK1 185 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 TPPP3Q9BW30 176 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 OR10A2Q9H208 303 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 METTL7AQ9H8H3 244 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 RAXQ9Y2V3 346 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 F11RQ9Y624 299 aaKnown RBP7.32□□□□□ -1.24
NDE1-202ENST00000396355 FANCMQ8IYD8 2048 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 USP24Q9UPU5 2620 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 TRAV39A0A0B4J263 110 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 TMEM8BA6NDV4 472 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 H0Y8X5 98 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 PLPP3O14495 311 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 ZNF749O43361 778 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 ZNF17P17021 662 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 CCNOP22674 350 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 HTR1DP28221 377 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 HES3Q5TGS1 186 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 OR10V1Q8NGI7 309 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 AQP3Q92482 292 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 ANKRD9Q96BM1 317 aaPredicted RBP7.32□□□□□ -1.24
NDE1-202ENST00000396355 ANKRD10Q9NXR5 420 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 ZNF319Q9P2F9 582 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 LRIT1Q9P2V4 623 aa7.32□□□□□ -1.24
NDE1-202ENST00000396355 TSSC4Q9Y5U2 329 aaPredicted RBP7.32□□□□□ -1.24
NDE1-202ENST00000396355 MRPS18BQ9Y676 258 aaKnown RBP7.32□□□□□ -1.24
NDE1-202ENST00000396355 LMX1BO60663 402 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 HYPMO75409 117 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 CA2P00918 260 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 ZGLP1P0C6A0 271 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 FTH1P19P0C7X4 201 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 HIST1H1EP10412 219 aaKnown RBP7.31□□□□□ -1.24
NDE1-202ENST00000396355 RRADP55042 308 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 SCAND1P57086 179 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 HSD11B2P80365 405 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 RAB35Q15286 201 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 CXorf66Q5JRM2 361 aaPredicted RBP7.31□□□□□ -1.24
NDE1-202ENST00000396355 TMEM92Q6UXU6 159 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 VN1R4Q7Z5H5 301 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 LRRC25Q8N386 305 aaPredicted RBP7.31□□□□□ -1.24
NDE1-202ENST00000396355 NPEPL1Q8NDH3 523 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 OR5B3Q8NH48 314 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 SLC35A4Q96G79 324 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 C5orf66Q9H5L9 145 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 KCNIP2Q9NS61 270 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 THAP10Q9P2Z0 257 aaPredicted RBP7.31□□□□□ -1.24
NDE1-202ENST00000396355 ABCA1O95477 2261 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 PPIAL4EA0A075B759 164 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 A0A087WWC5 75 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 PGPEP1LA6NFU8 196 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 PPIAL4FP0DN26 164 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 SLC25A1P53007 311 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 PSG9Q00887 426 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 PLAURQ03405 335 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 RPEL1Q2QD12 228 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 PRTGQ2VWP7 1150 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 OR10G8Q8NGN5 311 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 ZPLD1Q8TCW7 415 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms