RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 SAA2-SAA4A0A096LPE2 208 aa12.95□□□□□ -0.34
PTPRK-208ENST00000392449 PTGES3LE9PB15 166 aa12.95□□□□□ -0.34
PTPRK-208ENST00000392449 CASQ2O14958 399 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-208ENST00000392449 GLAP06280 429 aa12.95□□□□□ -0.34
PTPRK-208ENST00000392449 CDK1P06493 297 aa12.95□□□□□ -0.34
PTPRK-208ENST00000392449 SAA2P0DJI9 122 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-208ENST00000392449 CDX1P47902 265 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-208ENST00000392449 ACTBP60709 375 aa12.95□□□□□ -0.34
PTPRK-208ENST00000392449 UNC119Q13432 240 aa12.95□□□□□ -0.34
PTPRK-208ENST00000392449 UNQ9370/PRO34162Q6UXP9 181 aa12.95□□□□□ -0.34
PTPRK-208ENST00000392449 OR8U1Q8NH10 309 aa12.95□□□□□ -0.34
PTPRK-208ENST00000392449 IL1F10Q8WWZ1 152 aa12.95□□□□□ -0.34
PTPRK-208ENST00000392449 NABP2Q9BQ15 211 aa12.95□□□□□ -0.34
PTPRK-208ENST00000392449 GON7Q9BXV9 100 aa12.95□□□□□ -0.34
PTPRK-208ENST00000392449 PARP12Q9H0J9 701 aaKnown RBP12.95□□□□□ -0.34
PTPRK-208ENST00000392449 JPT1Q9UK76 154 aa12.95□□□□□ -0.34
PTPRK-208ENST00000392449 LSM2Q9Y333 95 aaKnown RBP12.95□□□□□ -0.34
PTPRK-208ENST00000392449 A0A0A6YYD4 124 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 ST8SIA5O15466 376 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 IGF1P05019 195 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 ELANEP08246 267 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 PSMB8P28062 276 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 RPS27AP62979 156 aaKnown RBP12.94□□□□□ -0.34
PTPRK-208ENST00000392449 DGCR2P98153 550 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 KIR2DS1Q14954 304 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 HMGN3Q15651 99 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 STEAP3Q658P3 488 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 NEDD4LQ96PU5 975 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 OR5B12Q96R08 314 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 PRR25Q96S07 402 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 MND1Q9BWT6 205 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 TMEM59Q9BXS4 323 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 IFI27L2Q9H2X8 130 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 GNB4Q9HAV0 340 aa12.94□□□□□ -0.34
PTPRK-208ENST00000392449 ATP6V0E1O15342 81 aa12.93□□□□□ -0.34
PTPRK-208ENST00000392449 YPEL1O60688 119 aa12.93□□□□□ -0.34
PTPRK-208ENST00000392449 HTD2P86397 168 aa12.93□□□□□ -0.34
PTPRK-208ENST00000392449 C1orf100Q5SVJ3 147 aa12.93□□□□□ -0.34
PTPRK-208ENST00000392449 ZNF833PQ6ZTB9 187 aa12.93□□□□□ -0.34
PTPRK-208ENST00000392449 CEACAM19Q7Z692 300 aa12.93□□□□□ -0.34
PTPRK-208ENST00000392449 SETD6Q8TBK2 473 aa12.93□□□□□ -0.34
PTPRK-208ENST00000392449 C4orf3Q8WVX3 66 aa12.93□□□□□ -0.34
PTPRK-208ENST00000392449 TMEM203Q969S6 136 aa12.93□□□□□ -0.34
PTPRK-208ENST00000392449 GALMQ96C23 342 aa12.93□□□□□ -0.34
PTPRK-208ENST00000392449 YPEL2Q96QA6 119 aa12.93□□□□□ -0.34
PTPRK-208ENST00000392449 B9D2Q9BPU9 175 aa12.93□□□□□ -0.34
PTPRK-208ENST00000392449 HDHD3Q9BSH5 251 aaPredicted RBP12.93□□□□□ -0.34
PTPRK-208ENST00000392449 ANKRD60Q9BZ19 345 aa12.93□□□□□ -0.34
PTPRK-208ENST00000392449 PARP11Q9NR21 331 aa12.93□□□□□ -0.34
PTPRK-208ENST00000392449 GHRLQ9UBU3 117 aa12.93□□□□□ -0.34
PTPRK-208ENST00000392449 NKX1-2Q9UD57 310 aaPredicted RBP12.93□□□□□ -0.34
PTPRK-208ENST00000392449 IGHV7-81A0A0B4J1V7 117 aa12.92□□□□□ -0.34
PTPRK-208ENST00000392449 SNRPBP14678 240 aaKnown RBP12.92□□□□□ -0.34
PTPRK-208ENST00000392449 QRFPP83859 136 aa12.92□□□□□ -0.34
PTPRK-208ENST00000392449 KIAA0141Q14154 515 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-208ENST00000392449 MED22Q15528 200 aa12.92□□□□□ -0.34
PTPRK-208ENST00000392449 RPL39P5Q59GN2 51 aa12.92□□□□□ -0.34
PTPRK-208ENST00000392449 GLT8D1Q68CQ7 371 aa12.92□□□□□ -0.34
PTPRK-208ENST00000392449 GLDNQ6ZMI3 551 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-208ENST00000392449 SVOPQ8N4V2 548 aa12.92□□□□□ -0.34
PTPRK-208ENST00000392449 OR2AK2Q8NG84 335 aa12.92□□□□□ -0.34
PTPRK-208ENST00000392449 OR5M8Q8NGP6 311 aa12.92□□□□□ -0.34
PTPRK-208ENST00000392449 THRSPQ92748 146 aa12.92□□□□□ -0.34
PTPRK-208ENST00000392449 GFI1Q99684 422 aa12.92□□□□□ -0.34
PTPRK-208ENST00000392449 ZNF251Q9BRH9 671 aa12.92□□□□□ -0.34
PTPRK-208ENST00000392449 SEC14L6B5MCN3 397 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 NBR2O15453 112 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 UBBP0CG47 229 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 SRMP19623 302 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 BLVRBP30043 206 aaPredicted RBP12.91□□□□□ -0.34
PTPRK-208ENST00000392449 PPIFP30405 207 aaKnown RBP12.91□□□□□ -0.34
PTPRK-208ENST00000392449 NDPQ00604 133 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 FHL3Q13643 280 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 P2RY14Q15391 338 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 SPHARQ15513 63 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 HSD17B12Q53GQ0 312 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 ASPHD1Q5U4P2 390 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 LIPKQ5VXJ0 399 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 FAM131AQ6UXB0 335 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 ZNF554Q86TJ5 538 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 MS4A15Q8N5U1 240 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 OR11H1Q8NG94 326 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 MYOZ3Q8TDC0 251 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 CASTOR1Q8WTX7 329 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 TM2D1Q9BX74 207 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 OR51J1Q9H342 316 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 CHMP1AQ9HD42 196 aaPredicted RBP12.91□□□□□ -0.34
PTPRK-208ENST00000392449 SCOCQ9UIL1 159 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 FBXO7Q9Y3I1 522 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 TMEM14DPA8MWL7 114 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 SLC22A1O15245 554 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 SOCS1O15524 211 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 NAPSAO96009 420 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 ECI1P42126 302 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 GNB1P62873 340 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 C5orf64Q2M2E5 130 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 PHYHIPQ92561 330 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 ABHD14BQ96IU4 210 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 ALX4Q9H161 411 aaPredicted RBP12.91□□□□□ -0.34
PTPRK-208ENST00000392449 ABRACLQ9P1F3 81 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms