RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 OR3A3P47888 321 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 WNT4P56705 351 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 HTD2P86397 168 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 KIAA0141Q14154 515 aaPredicted RBP13.13□□□□□ -0.31
SMN2-201ENST00000380741 ZNF833PQ6ZTB9 187 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 PACRGLQ8N7B6 248 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 UBE2E2Q96LR5 201 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 NABP2Q9BQ15 211 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 CHCHD6Q9BRQ6 235 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 CST11Q9H112 138 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 OR51J1Q9H342 316 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 CNOT2Q9NZN8 540 aaKnown RBP13.13□□□□□ -0.31
SMN2-201ENST00000380741 U3KQK5 164 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 SAA2-SAA4A0A096LPE2 208 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 EBAG9O00559 213 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 NBR2O15453 112 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 YPEL1O60688 119 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 SAA2P0DJI9 122 aaPredicted RBP13.12□□□□□ -0.31
SMN2-201ENST00000380741 MAPK3P27361 379 aaPredicted RBP13.12□□□□□ -0.31
SMN2-201ENST00000380741 ZNF260Q3ZCT1 412 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 ASPHD1Q5U4P2 390 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 TMEM65Q6PI78 240 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 AHSA2Q719I0 299 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 ZNF491Q8N8L2 437 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 YPEL2Q96QA6 119 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 SULT4A1Q9BR01 284 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 ZNF251Q9BRH9 671 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 ANKRD60Q9BZ19 345 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 C8orf4Q9NR00 106 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 PARP11Q9NR21 331 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 GHRLQ9UBU3 117 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 PSORS1C1Q9UIG5 152 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 SORL1Q92673 2214 aa13.12□□□□□ -0.31
SMN2-201ENST00000380741 IGHV7-81A0A0B4J1V7 117 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 I3L521 148 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 RGS11O94810 467 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 IGLV1-40P01703 118 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 OR8U8P0C7N1 319 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 CHATP28329 748 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 BLVRBP30043 206 aaPredicted RBP13.11□□□□□ -0.31
SMN2-201ENST00000380741 GNB1P62873 340 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 INSL4Q14641 139 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 HMGN3Q15651 99 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 C5orf64Q2M2E5 130 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 LY6G6FQ5SQ64 297 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 OR10K2Q6IF99 312 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 C8orf59Q8N0T1 100 aaPredicted RBP13.11□□□□□ -0.31
SMN2-201ENST00000380741 NANOGP1Q8N7R0 232 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 OR2AK2Q8NG84 335 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 OR1N2Q8NGR9 330 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 THRSPQ92748 146 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 GALMQ96C23 342 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 OR5B12Q96R08 314 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 IFI27L2Q9H2X8 130 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 VSIG4Q9Y279 399 aa13.11□□□□□ -0.31
SMN2-201ENST00000380741 ZNF256Q9Y2P7 627 aaPredicted RBP13.11□□□□□ -0.31
SMN2-201ENST00000380741 TRAV41A0A0B4J266 112 aa13.1□□□□□ -0.31
SMN2-201ENST00000380741 RUNX1Q01196 453 aa13.1□□□□□ -0.31
SMN2-201ENST00000380741 FAM27D1Q5T7N8 215 aa13.1□□□□□ -0.31
SMN2-201ENST00000380741 C6orf201Q7Z4U5 140 aa13.1□□□□□ -0.31
SMN2-201ENST00000380741 NPBQ8NG41 125 aa13.1□□□□□ -0.31
SMN2-201ENST00000380741 NEDD4LQ96PU5 975 aa13.1□□□□□ -0.31
SMN2-201ENST00000380741 FAAP24Q9BTP7 215 aa13.1□□□□□ -0.31
SMN2-201ENST00000380741 PLCXD1Q9NUJ7 323 aa13.1□□□□□ -0.31
SMN2-201ENST00000380741 NDUFA3O95167 84 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 UBBP0CG47 229 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 RAB9AP51151 201 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 RPS27AP62979 156 aaKnown RBP13.09□□□□□ -0.31
SMN2-201ENST00000380741 NDPQ00604 133 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 ZNF616Q08AN1 781 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 LIN54Q6MZP7 749 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 MINDY2Q8NBR6 621 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 BPIFB6Q8NFQ5 453 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 FBLIM1Q8WUP2 373 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 IL1F10Q8WWZ1 152 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 ASCL2Q99929 193 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 TMEM59Q9BXS4 323 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 KCNK15Q9H427 330 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 FKBP14Q9NWM8 211 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 ABRACLQ9P1F3 81 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 KIAA1456Q9P272 454 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 LRRC42Q9Y546 428 aa13.09□□□□□ -0.31
SMN2-201ENST00000380741 ST8SIA5O15466 376 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 HTR2CP28335 458 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 INSL3P51460 131 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 UNC119Q13432 240 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 RCN1Q15293 331 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 ECSCRQ19T08 205 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 ACSM3Q53FZ2 586 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 RBM48Q5RL73 367 aaKnown RBP13.08□□□□□ -0.32
SMN2-201ENST00000380741 FAM71F2Q6NXP2 309 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 FAM131AQ6UXB0 335 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 LRRTM1Q86UE6 522 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 SVOPQ8N4V2 548 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 NICN1Q9BSH3 213 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 STEAP1Q9UHE8 339 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 ERGIC3Q9Y282 383 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 FBXO7Q9Y3I1 522 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 DNAH7Q8WXX0 4024 aa13.08□□□□□ -0.32
SMN2-201ENST00000380741 SOX15O60248 233 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms